LINC02823

Summary

LINC02823 (long intergenic non-protein coding RNA 2823, HGNC:54354) is a long non-coding RNA gene on chromosome 12q21.33.

At a glance

• Gene type: non-coding (lncRNA) — no protein product; not a drug target. Variant/disease associations are omitted (they would be positional, from an overlapping protein-coding gene).

Identifiers

Gene identifiers

Field	Value
HGNC ID	HGNC:54354
Approved symbol	LINC02823
Name	long intergenic non-protein coding RNA 2823
Location	12q21.33
Locus type	RNA, long non-coding
Status	Approved
Ensembl gene	ENSG00000258100
Ensembl biotype	lncRNA
Entrez	105369897
RNAcentral	URS00026A25C5 — lncRNA, 1261 nt, 1 organism(s)

Gene structure

Transcript identifiers

Ensembl transcripts: 10 — 10 lncRNA

ENST00000551571, ENST00000651000, ENST00000657916, ENST00000660548, ENST00000661839, ENST00000667542, ENST00000669621, ENST00000747786, ENST00000747787, ENST00000747788

RefSeq mRNA: 0 — MANE Select: None

Canonical transcript exons

ENST00000551571 — 2 exons

Exon	Start	End
ENSE00002324741	91362196	91362413
ENSE00002332474	91367931	91368606

Expression profiles

Bgee: expression breadth ubiquitous, 112 present calls, max score 80.88.

Top tissues by expression

112 total, by Bgee expression score (0-100, higher = more expressed):

Tissue	Anatomy ID	Expression score	Quality
male germ line stem cell (sensu Vertebrata) in testis	CL:0000089 ∩ UBERON:0000473	80.88	gold quality
tonsil	UBERON:0002372	70.12	gold quality
calcaneal tendon	UBERON:0003701	68.57	gold quality
cerebellar cortex	UBERON:0002129	61.84	gold quality
cerebellum	UBERON:0002037	61.76	gold quality
cerebellar hemisphere	UBERON:0002245	61.74	gold quality
right hemisphere of cerebellum	UBERON:0014890	60.66	gold quality
ventricular zone	UBERON:0003053	60.23	gold quality
skeletal muscle tissue	UBERON:0001134	59.23	gold quality
gall bladder	UBERON:0002110	58.93	gold quality
primordial germ cell in gonad	CL:0000670 ∩ UBERON:0000991	58.85	gold quality
liver	UBERON:0002107	58.50	silver quality
hindlimb stylopod muscle	UBERON:0004252	58.16	gold quality
prefrontal cortex	UBERON:0000451	54.89	gold quality
right adrenal gland cortex	UBERON:0035827	54.17	gold quality
brain	UBERON:0000955	54.02	gold quality
left adrenal gland cortex	UBERON:0035825	53.38	gold quality
adrenal gland	UBERON:0002369	52.75	gold quality
left adrenal gland	UBERON:0001234	52.10	gold quality
right adrenal gland	UBERON:0001233	51.88	gold quality
blood	UBERON:0000178	51.59	silver quality
monocyte	CL:0000576	51.57	silver quality
olfactory segment of nasal mucosa	UBERON:0005386	51.05	gold quality
ovary	UBERON:0000992	50.69	gold quality
muscle of leg	UBERON:0001383	50.65	gold quality
duodenum	UBERON:0002114	50.64	gold quality
lymph node	UBERON:0000029	50.45	gold quality
smooth muscle tissue	UBERON:0001135	50.18	gold quality
left ovary	UBERON:0002119	50.08	gold quality
islet of Langerhans	UBERON:0000006	50.05	gold quality

Single-cell (SCXA)

Detected in 1 experiment(s), a significant marker in 1.

Experiment	Marker?	Max mean expression
E-ANND-3	yes	4.42

Regulation

Is transcription factor: no

Cross-species orthologs

0 orthologs

Protein

Non-coding RNA — no protein product; not a drug target.

Function

No curated pathway, Gene-Ontology, or interaction data.

Disease & clinical

No curated disease, variant, or cancer-driver associations.

Drugs & pharmacology

No drug or pharmacology data — not an established drug target.