LINC02824

Summary

LINC02824 (long intergenic non-protein coding RNA 2824, HGNC:54356) is a long non-coding RNA gene on chromosome 12q24.32.

At a glance

• Gene type: non-coding (lncRNA) — no protein product; not a drug target. Variant/disease associations are omitted (they would be positional, from an overlapping protein-coding gene).

Identifiers

Gene identifiers

Field	Value
HGNC ID	HGNC:54356
Approved symbol	LINC02824
Name	long intergenic non-protein coding RNA 2824
Location	12q24.32
Locus type	RNA, long non-coding
Status	Approved
Ensembl gene	ENSG00000255998
Ensembl biotype	lncRNA
Entrez	105370060
RNAcentral	URS00026A254F — lncRNA, 1635 nt, 1 organism(s)

Gene structure

Transcript identifiers

Ensembl transcripts: 10 — 10 lncRNA

ENST00000544711, ENST00000545535, ENST00000653842, ENST00000653913, ENST00000656606, ENST00000667303, ENST00000809673, ENST00000809674, ENST00000809675, ENST00000809676

RefSeq mRNA: 0 — MANE Select: None

Canonical transcript exons

ENST00000544711 — 2 exons

Exon	Start	End
ENSE00002229148	126690479	126690698
ENSE00002295299	126691800	126691918

Expression profiles

Bgee: expression breadth broad, 60 present calls, max score 94.57.

Top tissues by expression

60 total, by Bgee expression score (0-100, higher = more expressed):

Tissue	Anatomy ID	Expression score	Quality
male germ line stem cell (sensu Vertebrata) in testis	CL:0000089 ∩ UBERON:0000473	94.57	gold quality
bone marrow cell	CL:0002092	73.73	gold quality
left testis	UBERON:0004533	71.91	gold quality
right testis	UBERON:0004534	71.91	gold quality
testis	UBERON:0000473	71.21	gold quality
ganglionic eminence	UBERON:0004023	62.59	gold quality
tonsil	UBERON:0002372	58.61	silver quality
multicellular organism	UBERON:0000468	57.34	gold quality
monocyte	CL:0000576	55.69	gold quality
prefrontal cortex	UBERON:0000451	54.00	gold quality
corpus callosum	UBERON:0002336	53.13	gold quality
blood	UBERON:0000178	53.01	silver quality
popliteal artery	UBERON:0002250	52.47	gold quality
liver	UBERON:0002107	50.99	silver quality
tibial artery	UBERON:0007610	50.16	gold quality
right adrenal gland	UBERON:0001233	49.47	gold quality
body of pancreas	UBERON:0001150	49.46	gold quality
myometrium	UBERON:0001296	47.52	gold quality
muscle of leg	UBERON:0001383	47.32	gold quality
amygdala	UBERON:0001876	47.26	gold quality
gastrocnemius	UBERON:0001388	46.89	gold quality
urinary bladder	UBERON:0001255	46.78	silver quality
lymph node	UBERON:0000029	46.40	silver quality
esophagogastric junction muscularis propria	UBERON:0035841	45.74	gold quality
left adrenal gland	UBERON:0001234	45.62	gold quality
fundus of stomach	UBERON:0001160	45.56	gold quality
left adrenal gland cortex	UBERON:0035825	45.46	gold quality
right hemisphere of cerebellum	UBERON:0014890	44.91	silver quality
vermiform appendix	UBERON:0001154	43.70	silver quality
dorsolateral prefrontal cortex	UBERON:0009834	43.54	silver quality

Single-cell (SCXA)

Detected in 1 experiment(s), a significant marker in 0.

Experiment	Marker?	Max mean expression
E-ANND-3	no	1.63

Regulation

Is transcription factor: no

Cross-species orthologs

0 orthologs

Protein

Non-coding RNA — no protein product; not a drug target.

Function

No curated pathway, Gene-Ontology, or interaction data.

Disease & clinical

No curated disease, variant, or cancer-driver associations.

Drugs & pharmacology

No drug or pharmacology data — not an established drug target.