LINC02826

Summary

LINC02826 (long intergenic non-protein coding RNA 2826, HGNC:54357) is a long non-coding RNA gene on chromosome 12q24.32.

At a glance

• Gene type: non-coding (lncRNA) — no protein product; not a drug target. Variant/disease associations are omitted (they would be positional, from an overlapping protein-coding gene).

Identifiers

Gene identifiers

Field	Value
HGNC ID	HGNC:54357
Approved symbol	LINC02826
Name	long intergenic non-protein coding RNA 2826
Location	12q24.32
Locus type	RNA, long non-coding
Status	Approved
Ensembl gene	ENSG00000275212
Ensembl biotype	lncRNA
Entrez	105370057
RNAcentral	URS00026A2394 — lncRNA, 1714 nt, 1 organism(s)

Gene structure

Transcript identifiers

Ensembl transcripts: 26 — 26 lncRNA

ENST00000534849, ENST00000620193, ENST00000642407, ENST00000653364, ENST00000653418, ENST00000659525, ENST00000660252, ENST00000661236, ENST00000665464, ENST00000665882, ENST00000668594, ENST00000821911, ENST00000821912, ENST00000821913, ENST00000821914, ENST00000821915, ENST00000821916, ENST00000821917, ENST00000821918, ENST00000821919, ENST00000821920, ENST00000821921, ENST00000821922, ENST00000821923, ENST00000821924, ENST00000821925

RefSeq mRNA: 0 — MANE Select: None

Canonical transcript exons

ENST00000534849 — 3 exons

Exon	Start	End
ENSE00002294973	125985609	125985750
ENSE00004229186	125983394	125983740
ENSE00004229206	125985846	125986932

Expression profiles

Bgee: expression breadth ubiquitous, 113 present calls, max score 85.83.

Top tissues by expression

113 total, by Bgee expression score (0-100, higher = more expressed):

Tissue	Anatomy ID	Expression score	Quality
male germ line stem cell (sensu Vertebrata) in testis	CL:0000089 ∩ UBERON:0000473	85.83	gold quality
testis	UBERON:0000473	73.63	gold quality
left testis	UBERON:0004533	73.52	gold quality
right testis	UBERON:0004534	72.31	gold quality
primordial germ cell in gonad	CL:0000670 ∩ UBERON:0000991	72.20	gold quality
placenta	UBERON:0001987	68.37	gold quality
cortical plate	UBERON:0005343	67.88	gold quality
sural nerve	UBERON:0015488	67.81	silver quality
ganglionic eminence	UBERON:0004023	64.18	gold quality
ventricular zone	UBERON:0003053	63.93	gold quality
right uterine tube	UBERON:0001302	62.21	gold quality
olfactory segment of nasal mucosa	UBERON:0005386	62.16	gold quality
duodenum	UBERON:0002114	60.21	gold quality
small intestine	UBERON:0002108	58.77	gold quality
small intestine Peyer’s patch	UBERON:0003454	58.13	gold quality
primary visual cortex	UBERON:0002436	57.37	gold quality
right lobe of liver	UBERON:0001114	57.18	gold quality
mucosa of stomach	UBERON:0001199	57.18	gold quality
prefrontal cortex	UBERON:0000451	57.06	gold quality
tonsil	UBERON:0002372	56.92	gold quality
minor salivary gland	UBERON:0001830	56.61	gold quality
saliva-secreting gland	UBERON:0001044	56.43	gold quality
liver	UBERON:0002107	56.35	gold quality
superior frontal gyrus	UBERON:0002661	56.20	gold quality
frontal cortex	UBERON:0001870	55.03	gold quality
metanephros cortex	UBERON:0010533	54.97	gold quality
vermiform appendix	UBERON:0001154	54.84	gold quality
gall bladder	UBERON:0002110	54.84	gold quality
prostate gland	UBERON:0002367	53.86	gold quality
endometrium	UBERON:0001295	53.81	gold quality

Single-cell (SCXA)

Detected in 1 experiment(s), a significant marker in 0.

Experiment	Marker?	Max mean expression
E-ANND-3	no	4.07

Regulation

Is transcription factor: no

Cross-species orthologs

0 orthologs

Protein

Non-coding RNA — no protein product; not a drug target.

Function

No curated pathway, Gene-Ontology, or interaction data.

Disease & clinical

No curated disease, variant, or cancer-driver associations.

Drugs & pharmacology

No drug or pharmacology data — not an established drug target.