LINC02829

Summary

LINC02829 (long intergenic non-protein coding RNA 2829, HGNC:54362) is a long non-coding RNA gene on chromosome 6p22.1.

At a glance

• Gene type: non-coding (lncRNA) — no protein product; not a drug target. Variant/disease associations are omitted (they would be positional, from an overlapping protein-coding gene).

Identifiers

Gene identifiers

Field	Value
HGNC ID	HGNC:54362
Approved symbol	LINC02829
Name	long intergenic non-protein coding RNA 2829
Location	6p22.1
Locus type	RNA, long non-coding
Status	Approved
Ensembl gene	ENSG00000229274
Ensembl biotype	lncRNA
Entrez	105375009
RNAcentral	URS00026A1C7D — lncRNA, 919 nt, 1 organism(s)

Gene structure

Transcript identifiers

Ensembl transcripts: 9 — 9 lncRNA

ENST00000436804, ENST00000661850, ENST00000824900, ENST00000824901, ENST00000824902, ENST00000824903, ENST00000824904, ENST00000824905, ENST00000824906

RefSeq mRNA: 0 — MANE Select: None

Canonical transcript exons

ENST00000436804 — 4 exons

Exon	Start	End
ENSE00001717393	29510268	29510558
ENSE00001753116	29505321	29505377
ENSE00001780769	29507169	29507668
ENSE00004234644	29497473	29497539

Expression profiles

Bgee: expression breadth broad, 94 present calls, max score 69.09.

Top tissues by expression

94 total, by Bgee expression score (0-100, higher = more expressed):

Tissue	Anatomy ID	Expression score	Quality
colonic epithelium	UBERON:0000397	69.09	silver quality
lower esophagus muscularis layer	UBERON:0035833	62.64	gold quality
lower esophagus	UBERON:0013473	62.56	gold quality
gall bladder	UBERON:0002110	62.53	gold quality
mucosa of stomach	UBERON:0001199	61.71	gold quality
esophagogastric junction muscularis propria	UBERON:0035841	61.15	gold quality
hindlimb stylopod muscle	UBERON:0004252	58.33	gold quality
primordial germ cell in gonad	CL:0000670 ∩ UBERON:0000991	57.72	gold quality
endometrium	UBERON:0001295	57.59	gold quality
esophagus	UBERON:0001043	57.05	gold quality
urinary bladder	UBERON:0001255	55.85	gold quality
small intestine	UBERON:0002108	55.09	gold quality
mucosa of transverse colon	UBERON:0004991	54.94	gold quality
duodenum	UBERON:0002114	54.72	gold quality
small intestine Peyer’s patch	UBERON:0003454	54.28	gold quality
left uterine tube	UBERON:0001303	54.21	gold quality
lymph node	UBERON:0000029	54.17	gold quality
transverse colon	UBERON:0001157	53.95	gold quality
intestine	UBERON:0000160	53.72	gold quality
colon	UBERON:0001155	53.29	gold quality
smooth muscle tissue	UBERON:0001135	53.07	gold quality
right ovary	UBERON:0002118	52.25	gold quality
omental fat pad	UBERON:0010414	52.08	gold quality
muscle layer of sigmoid colon	UBERON:0035805	52.03	gold quality
body of uterus	UBERON:0009853	51.91	gold quality
rectum	UBERON:0001052	51.42	gold quality
esophagus mucosa	UBERON:0002469	51.28	gold quality
body of stomach	UBERON:0001161	51.11	gold quality
putamen	UBERON:0001874	51.10	gold quality
multicellular organism	UBERON:0000468	50.93	gold quality

Single-cell (SCXA)

Detected in 1 experiment(s), a significant marker in 0.

Experiment	Marker?	Max mean expression
E-ANND-3	no	2.36

Regulation

Is transcription factor: no

Cross-species orthologs

0 orthologs

Protein

Non-coding RNA — no protein product; not a drug target.

Function

No curated pathway, Gene-Ontology, or interaction data.

Disease & clinical

No curated disease, variant, or cancer-driver associations.

Drugs & pharmacology

No drug or pharmacology data — not an established drug target.