LINC02831

Summary

LINC02831 (long intergenic non-protein coding RNA 2831, HGNC:54365) is a long non-coding RNA gene on chromosome 2p14.

At a glance

• Gene type: non-coding (lncRNA) — no protein product; not a drug target. Variant/disease associations are omitted (they would be positional, from an overlapping protein-coding gene).

Identifiers

Gene identifiers

Field	Value
HGNC ID	HGNC:54365
Approved symbol	LINC02831
Name	long intergenic non-protein coding RNA 2831
Location	2p14
Locus type	RNA, long non-coding
Status	Approved
Ensembl gene	ENSG00000224173
Ensembl biotype	lncRNA
Entrez	102724373
RNAcentral	URS0000EF2079 — lncRNA, 1073 nt, 1 organism(s)

Gene structure

Transcript identifiers

Ensembl transcripts: 32 — 32 lncRNA

ENST00000433065, ENST00000654087, ENST00000654731, ENST00000656421, ENST00000657087, ENST00000657136, ENST00000657510, ENST00000658583, ENST00000660443, ENST00000662012, ENST00000662337, ENST00000665414, ENST00000665794, ENST00000665979, ENST00000666140, ENST00000666185, ENST00000666947, ENST00000667125, ENST00000668393, ENST00000670216, ENST00000670245, ENST00000670387, ENST00000671625, ENST00000671664, ENST00000833777, ENST00000833778, ENST00000833779, ENST00000833780, ENST00000833781, ENST00000833782, ENST00000833783, ENST00000833784

RefSeq mRNA: 0 — MANE Select: None

Canonical transcript exons

ENST00000433065 — 6 exons

Exon	Start	End
ENSE00001612888	67565577	67565710
ENSE00001645571	67568008	67568156
ENSE00001651082	67570002	67570100
ENSE00001660073	67562067	67562247
ENSE00001729186	67573797	67574044
ENSE00001785046	67566776	67566972

Expression profiles

Bgee: expression breadth broad, 96 present calls, max score 87.13.

FANTOM5 (CAGE): breadth tissue_specific, TPM avg 0.0506 / max 6.9491, expressed in 28 samples.

FANTOM5 promoters (1 alternative TSS)

Promoter ID	TPM avg	Samples expressed
20667	0.0506	28

Top tissues by expression

96 total, by Bgee expression score (0-100, higher = more expressed):

Tissue	Anatomy ID	Expression score	Quality
male germ line stem cell (sensu Vertebrata) in testis	CL:0000089 ∩ UBERON:0000473	87.13	gold quality
islet of Langerhans	UBERON:0000006	78.66	gold quality
pancreas	UBERON:0001264	72.42	gold quality
left testis	UBERON:0004533	70.89	gold quality
testis	UBERON:0000473	70.54	gold quality
right testis	UBERON:0004534	69.64	gold quality
body of pancreas	UBERON:0001150	68.92	gold quality
stromal cell of endometrium	CL:0002255	60.71	gold quality
ventricular zone	UBERON:0003053	59.06	silver quality
liver	UBERON:0002107	56.58	gold quality
adrenal tissue	UBERON:0018303	55.09	gold quality
monocyte	CL:0000576	54.24	gold quality
placenta	UBERON:0001987	54.02	gold quality
blood	UBERON:0000178	53.27	gold quality
multicellular organism	UBERON:0000468	51.87	gold quality
smooth muscle tissue	UBERON:0001135	51.65	gold quality
primordial germ cell in gonad	CL:0000670 ∩ UBERON:0000991	50.46	silver quality
right lobe of liver	UBERON:0001114	50.32	silver quality
right adrenal gland cortex	UBERON:0035827	50.27	gold quality
adrenal gland	UBERON:0002369	49.97	gold quality
endometrium	UBERON:0001295	49.92	gold quality
gastrocnemius	UBERON:0001388	49.70	gold quality
right adrenal gland	UBERON:0001233	49.52	gold quality
left adrenal gland	UBERON:0001234	49.35	gold quality
left adrenal gland cortex	UBERON:0035825	49.10	gold quality
stomach	UBERON:0000945	48.59	gold quality
kidney	UBERON:0002113	48.32	silver quality
descending thoracic aorta	UBERON:0002345	47.94	gold quality
tibial artery	UBERON:0007610	47.72	gold quality
adult mammalian kidney	UBERON:0000082	47.55	gold quality

Single-cell (SCXA)

Detected in 1 experiment(s), a significant marker in 1.

Experiment	Marker?	Max mean expression
E-ANND-3	yes	2.77

Regulation

Is transcription factor: no

Cross-species orthologs

0 orthologs

Protein

Non-coding RNA — no protein product; not a drug target.

Function

No curated pathway, Gene-Ontology, or interaction data.

Disease & clinical

No curated disease, variant, or cancer-driver associations.

Drugs & pharmacology

No drug or pharmacology data — not an established drug target.