LINC02832

Summary

LINC02832 (long intergenic non-protein coding RNA 2832, HGNC:54366) is a long non-coding RNA gene on chromosome 2q35.

At a glance

• Gene type: non-coding (lncRNA) — no protein product; not a drug target. Variant/disease associations are omitted (they would be positional, from an overlapping protein-coding gene).

Identifiers

Gene identifiers

Field	Value
HGNC ID	HGNC:54366
Approved symbol	LINC02832
Name	long intergenic non-protein coding RNA 2832
Location	2q35
Locus type	RNA, long non-coding
Status	Approved
Ensembl gene	ENSG00000227308
Ensembl biotype	lncRNA
Entrez	105373886
RNAcentral	URS00026A24F1 — lncRNA, 664 nt, 1 organism(s)

Gene structure

Transcript identifiers

Ensembl transcripts: 12 — 12 lncRNA

ENST00000416861, ENST00000442416, ENST00000606673, ENST00000607654, ENST00000724275, ENST00000724276, ENST00000724277, ENST00000724278, ENST00000724279, ENST00000724280, ENST00000724281, ENST00000724282

RefSeq mRNA: 0 — MANE Select: None

Canonical transcript exons

ENST00000416861 — 2 exons

Exon	Start	End
ENSE00001736787	219714257	219714686
ENSE00001787629	219686987	219687052

Expression profiles

Bgee: expression breadth ubiquitous, 146 present calls, max score 77.76.

FANTOM5 (CAGE): breadth tissue_specific, TPM avg 0.2928 / max 57.1950, expressed in 171 samples.

FANTOM5 promoters (6 alternative TSS)

Promoter ID	TPM avg	Samples expressed
25559	0.2444	161
25565	0.0182	6
25564	0.0129	1
25563	0.0124	3
25561	0.0030	1
25562	0.0018	1

Top tissues by expression

234 total, by Bgee expression score (0-100, higher = more expressed):

Tissue	Anatomy ID	Expression score	Quality
male germ line stem cell (sensu Vertebrata) in testis	CL:0000089 ∩ UBERON:0000473	77.76	gold quality
primordial germ cell in gonad	CL:0000670 ∩ UBERON:0000991	74.57	gold quality
buccal mucosa cell	CL:0002336	73.46	silver quality
olfactory segment of nasal mucosa	UBERON:0005386	72.05	gold quality
stromal cell of endometrium	CL:0002255	68.80	gold quality
ventricular zone	UBERON:0003053	68.04	gold quality
ganglionic eminence	UBERON:0004023	67.42	gold quality
right uterine tube	UBERON:0001302	67.33	gold quality
vermiform appendix	UBERON:0001154	62.59	gold quality
cortical plate	UBERON:0005343	61.70	gold quality
monocyte	CL:0000576	60.31	gold quality
gall bladder	UBERON:0002110	59.99	gold quality
calcaneal tendon	UBERON:0003701	56.69	gold quality
sural nerve	UBERON:0015488	56.22	silver quality
right coronary artery	UBERON:0001625	55.95	gold quality
nasal cavity mucosa	UBERON:0001826	55.78	gold quality
right lobe of liver	UBERON:0001114	54.21	gold quality
hindlimb stylopod muscle	UBERON:0004252	54.15	gold quality
tibial nerve	UBERON:0001323	53.89	gold quality
left ovary	UBERON:0002119	53.82	gold quality
fallopian tube	UBERON:0003889	53.72	gold quality
smooth muscle tissue	UBERON:0001135	53.36	gold quality
right ovary	UBERON:0002118	53.21	gold quality
left uterine tube	UBERON:0001303	53.19	gold quality
islet of Langerhans	UBERON:0000006	52.90	gold quality
upper leg skin	UBERON:0004262	52.87	silver quality
cardia of stomach	UBERON:0001162	51.66	gold quality
ovary	UBERON:0000992	51.46	gold quality
endocervix	UBERON:0000458	51.14	gold quality
popliteal artery	UBERON:0002250	51.07	gold quality

Single-cell (SCXA)

Detected in 1 experiment(s), a significant marker in 1.

Experiment	Marker?	Max mean expression
E-ANND-3	yes	10.02

Regulation

Is transcription factor: no

Cross-species orthologs

0 orthologs

Protein

Non-coding RNA — no protein product; not a drug target.

Function

No curated pathway, Gene-Ontology, or interaction data.

Disease & clinical

No curated disease, variant, or cancer-driver associations.

Drugs & pharmacology

No drug or pharmacology data — not an established drug target.