LINC02846

Summary

LINC02846 (long intergenic non-protein coding RNA 2846, HGNC:54381) is a long non-coding RNA gene on chromosome 9q34.3.

At a glance

• Gene type: non-coding (lncRNA) — no protein product; not a drug target. Variant/disease associations are omitted (they would be positional, from an overlapping protein-coding gene).

Identifiers

Gene identifiers

Field	Value
HGNC ID	HGNC:54381
Approved symbol	LINC02846
Name	long intergenic non-protein coding RNA 2846
Location	9q34.3
Locus type	RNA, long non-coding
Status	Approved
Ensembl gene	ENSG00000260193
Ensembl biotype	lncRNA
Entrez	105376323
RNAcentral	URS0002853B07 — lncRNA, 1043 nt, 1 organism(s)

Gene structure

Transcript identifiers

Ensembl transcripts: 6 — 6 lncRNA

ENST00000563018, ENST00000566567, ENST00000728639, ENST00000728640, ENST00000728641, ENST00000728642

RefSeq mRNA: 0 — MANE Select: None

Canonical transcript exons

ENST00000563018 — 2 exons

Exon	Start	End
ENSE00004055314	136109365	136109675
ENSE00004055318	136107764	136108819

Expression profiles

Bgee: expression breadth ubiquitous, 171 present calls, max score 90.28.

Top tissues by expression

212 total, by Bgee expression score (0-100, higher = more expressed):

Tissue	Anatomy ID	Expression score	Quality
tendon of biceps brachii	UBERON:0008188	90.28	gold quality
tendon	UBERON:0000043	84.77	silver quality
buccal mucosa cell	CL:0002336	83.96	silver quality
parotid gland	UBERON:0001831	83.24	silver quality
male germ line stem cell (sensu Vertebrata) in testis	CL:0000089 ∩ UBERON:0000473	83.18	silver quality
skeletal muscle tissue of rectus abdominis	UBERON:0004511	83.16	silver quality
primordial germ cell in gonad	CL:0000670 ∩ UBERON:0000991	78.42	gold quality
sperm	CL:0000019	77.68	gold quality
amniotic fluid	UBERON:0000173	76.91	silver quality
gingival epithelium	UBERON:0001949	75.70	gold quality
cartilage tissue	UBERON:0002418	74.38	silver quality
vena cava	UBERON:0004087	74.07	silver quality
cerebellar vermis	UBERON:0004720	73.99	silver quality
right testis	UBERON:0004534	73.82	gold quality
medial globus pallidus	UBERON:0002477	73.05	silver quality
globus pallidus	UBERON:0001875	72.36	silver quality
left testis	UBERON:0004533	72.34	gold quality
skeletal muscle tissue	UBERON:0001134	71.76	gold quality
oocyte	CL:0000023	71.58	gold quality
bone marrow	UBERON:0002371	71.33	gold quality
testis	UBERON:0000473	70.69	gold quality
pharyngeal mucosa	UBERON:0000355	70.56	gold quality
decidua	UBERON:0002450	70.55	silver quality
body of tongue	UBERON:0011876	70.45	gold quality
nasal cavity mucosa	UBERON:0001826	70.29	gold quality
esophagus squamous epithelium	UBERON:0006920	70.17	gold quality
pons	UBERON:0000988	70.08	silver quality
pylorus	UBERON:0001166	69.03	silver quality
tongue	UBERON:0001723	69.03	gold quality
thymus	UBERON:0002370	68.82	silver quality

Single-cell (SCXA)

Detected in 1 experiment(s), a significant marker in 0.

Experiment	Marker?	Max mean expression
E-ANND-3	no	0.64

Regulation

Is transcription factor: no

Cross-species orthologs

0 orthologs

Protein

Non-coding RNA — no protein product; not a drug target.

Function

No curated pathway, Gene-Ontology, or interaction data.

Disease & clinical

No curated disease, variant, or cancer-driver associations.

Drugs & pharmacology

No drug or pharmacology data — not an established drug target.