LINC02847

Summary

LINC02847 (long intergenic non-protein coding RNA 2847, HGNC:54383) is a long non-coding RNA gene on chromosome 8q11.21.

At a glance

• Gene type: non-coding (lncRNA) — no protein product; not a drug target. Variant/disease associations are omitted (they would be positional, from an overlapping protein-coding gene).

Identifiers

Gene identifiers

Field	Value
HGNC ID	HGNC:54383
Approved symbol	LINC02847
Name	long intergenic non-protein coding RNA 2847
Location	8q11.21
Locus type	RNA, long non-coding
Status	Approved
Ensembl gene	ENSG00000253702
Ensembl biotype	lncRNA
Entrez	105375823
RNAcentral	URS00026A25BB — lncRNA, 884 nt, 1 organism(s)

Gene structure

Transcript identifiers

Ensembl transcripts: 4 — 4 lncRNA

ENST00000523038, ENST00000795316, ENST00000795317, ENST00000795318

RefSeq mRNA: 0 — MANE Select: None

Canonical transcript exons

ENST00000523038 — 4 exons

Exon	Start	End
ENSE00002115162	48597458	48597518
ENSE00002118543	48620768	48621018
ENSE00002126965	48602108	48602229
ENSE00002131183	48600612	48600736

Expression profiles

Bgee: expression breadth broad, 93 present calls, max score 74.04.

FANTOM5 (CAGE): breadth tissue_specific, TPM avg 0.0496 / max 7.1092, expressed in 15 samples.

FANTOM5 promoters (1 alternative TSS)

Promoter ID	TPM avg	Samples expressed
92996	0.0496	15

Top tissues by expression

93 total, by Bgee expression score (0-100, higher = more expressed):

Tissue	Anatomy ID	Expression score	Quality
primordial germ cell in gonad	CL:0000670 ∩ UBERON:0000991	74.04	gold quality
hindlimb stylopod muscle	UBERON:0004252	65.69	gold quality
lymph node	UBERON:0000029	59.00	gold quality
skeletal muscle tissue	UBERON:0001134	58.25	gold quality
gall bladder	UBERON:0002110	57.88	gold quality
left uterine tube	UBERON:0001303	57.55	gold quality
calcaneal tendon	UBERON:0003701	54.71	gold quality
fallopian tube	UBERON:0003889	54.59	gold quality
islet of Langerhans	UBERON:0000006	53.99	gold quality
myometrium	UBERON:0001296	53.48	gold quality
monocyte	CL:0000576	52.76	gold quality
endometrium	UBERON:0001295	52.63	gold quality
descending thoracic aorta	UBERON:0002345	52.55	gold quality
olfactory segment of nasal mucosa	UBERON:0005386	51.62	gold quality
ectocervix	UBERON:0012249	50.50	gold quality
endocervix	UBERON:0000458	49.80	gold quality
adrenal tissue	UBERON:0018303	49.63	gold quality
right ovary	UBERON:0002118	49.48	gold quality
body of uterus	UBERON:0009853	49.32	gold quality
muscle of leg	UBERON:0001383	49.14	gold quality
blood	UBERON:0000178	49.06	silver quality
ovary	UBERON:0000992	48.92	gold quality
heart	UBERON:0000948	48.35	gold quality
heart left ventricle	UBERON:0002084	48.28	gold quality
left ovary	UBERON:0002119	48.14	gold quality
urinary bladder	UBERON:0001255	47.84	gold quality
left adrenal gland cortex	UBERON:0035825	47.53	gold quality
left coronary artery	UBERON:0001626	47.52	gold quality
vagina	UBERON:0000996	47.31	gold quality
tonsil	UBERON:0002372	47.17	gold quality

Single-cell (SCXA)

Detected in 1 experiment(s), a significant marker in 0.

Experiment	Marker?	Max mean expression
E-ANND-3	no	1.45

Regulation

Is transcription factor: no

Cross-species orthologs

0 orthologs

Protein

Non-coding RNA — no protein product; not a drug target.

Function

No curated pathway, Gene-Ontology, or interaction data.

Disease & clinical

No curated disease, variant, or cancer-driver associations.

Drugs & pharmacology

No drug or pharmacology data — not an established drug target.