LINC02854

Summary

LINC02854 (long intergenic non-protein coding RNA 2854, HGNC:54391) is a long non-coding RNA gene on chromosome 7p11.2.

At a glance

• Gene type: non-coding (lncRNA) — no protein product; not a drug target. Variant/disease associations are omitted (they would be positional, from an overlapping protein-coding gene).

Identifiers

Gene identifiers

Field	Value
HGNC ID	HGNC:54391
Approved symbol	LINC02854
Name	long intergenic non-protein coding RNA 2854
Location	7p11.2
Locus type	RNA, long non-coding
Status	Approved
Ensembl gene	ENSG00000238131
Ensembl biotype	lncRNA
Entrez	107986739
RNAcentral	URS0002A6A1A1 — lncRNA, 693 nt, 1 organism(s)

Gene structure

Transcript identifiers

Ensembl transcripts: 3 — 3 lncRNA

ENST00000418679, ENST00000668442, ENST00000722327

RefSeq mRNA: 0 — MANE Select: None

Canonical transcript exons

ENST00000418679 — 3 exons

Exon	Start	End
ENSE00001774151	53926676	53926985
ENSE00001790699	53930028	53930248
ENSE00003883557	53947651	53947804

Expression profiles

Bgee: expression breadth broad, 91 present calls, max score 91.89.

Top tissues by expression

91 total, by Bgee expression score (0-100, higher = more expressed):

Tissue	Anatomy ID	Expression score	Quality
colonic epithelium	UBERON:0000397	91.89	gold quality
primordial germ cell in gonad	CL:0000670 ∩ UBERON:0000991	60.43	gold quality
ganglionic eminence	UBERON:0004023	60.16	gold quality
stromal cell of endometrium	CL:0002255	58.04	gold quality
endometrium	UBERON:0001295	57.49	gold quality
calcaneal tendon	UBERON:0003701	55.82	gold quality
monocyte	CL:0000576	54.63	gold quality
adult mammalian kidney	UBERON:0000082	52.87	gold quality
bone marrow	UBERON:0002371	52.64	silver quality
blood	UBERON:0000178	51.22	gold quality
lower esophagus mucosa	UBERON:0035834	51.05	gold quality
cerebellum	UBERON:0002037	49.56	gold quality
muscle of leg	UBERON:0001383	49.08	gold quality
lymph node	UBERON:0000029	48.25	silver quality
olfactory segment of nasal mucosa	UBERON:0005386	48.24	gold quality
endocervix	UBERON:0000458	47.80	gold quality
gastrocnemius	UBERON:0001388	47.72	silver quality
tibial artery	UBERON:0007610	47.51	gold quality
popliteal artery	UBERON:0002250	47.44	gold quality
islet of Langerhans	UBERON:0000006	47.40	gold quality
ovary	UBERON:0000992	46.22	gold quality
right lobe of liver	UBERON:0001114	46.06	silver quality
descending thoracic aorta	UBERON:0002345	45.93	gold quality
myometrium	UBERON:0001296	45.88	silver quality
fundus of stomach	UBERON:0001160	45.66	gold quality
urinary bladder	UBERON:0001255	45.60	gold quality
body of pancreas	UBERON:0001150	45.54	silver quality
cerebellar hemisphere	UBERON:0002245	45.25	silver quality
thoracic aorta	UBERON:0001515	45.12	gold quality
right hemisphere of cerebellum	UBERON:0014890	44.99	silver quality

Single-cell (SCXA)

Detected in 1 experiment(s), a significant marker in 0.

Experiment	Marker?	Max mean expression
E-ANND-3	no	1.46

Regulation

Is transcription factor: no

Cross-species orthologs

0 orthologs

Protein

Non-coding RNA — no protein product; not a drug target.

Function

No curated pathway, Gene-Ontology, or interaction data.

Disease & clinical

No curated disease, variant, or cancer-driver associations.

Drugs & pharmacology

No drug or pharmacology data — not an established drug target.