LINC02857

Summary

LINC02857 (long intergenic non-protein coding RNA 2857, HGNC:54394) is a long non-coding RNA gene on chromosome 6q14.2.

At a glance

• Gene type: non-coding (lncRNA) — no protein product; not a drug target. Variant/disease associations are omitted (they would be positional, from an overlapping protein-coding gene).

Identifiers

Gene identifiers

Field	Value
HGNC ID	HGNC:54394
Approved symbol	LINC02857
Name	long intergenic non-protein coding RNA 2857
Location	6q14.2
Locus type	RNA, long non-coding
Status	Approved
Ensembl gene	ENSG00000230852
Ensembl biotype	lncRNA
Entrez	107986618
RNAcentral	URS0000DBB0D4 — lncRNA, 2300 nt, 1 organism(s)

Gene structure

Transcript identifiers

Ensembl transcripts: 1 — 1 lncRNA

ENST00000444796

RefSeq mRNA: 0 — MANE Select: None

Canonical transcript exons

ENST00000444796 — 4 exons

Exon	Start	End
ENSE00001738514	84024270	84026100
ENSE00001771183	84023027	84023110
ENSE00003832469	84019204	84019482
ENSE00003841150	84020884	84020989

Expression profiles

Bgee: expression breadth broad, 84 present calls, max score 70.96.

Top tissues by expression

84 total, by Bgee expression score (0-100, higher = more expressed):

Tissue	Anatomy ID	Expression score	Quality
male germ line stem cell (sensu Vertebrata) in testis	CL:0000089 ∩ UBERON:0000473	70.96	gold quality
prefrontal cortex	UBERON:0000451	64.64	gold quality
superior frontal gyrus	UBERON:0002661	64.16	gold quality
frontal cortex	UBERON:0001870	61.23	gold quality
Brodmann (1909) area 9	UBERON:0013540	60.55	gold quality
dorsolateral prefrontal cortex	UBERON:0009834	59.45	gold quality
cerebral cortex	UBERON:0000956	59.00	gold quality
cortical plate	UBERON:0005343	58.92	silver quality
anterior cingulate cortex	UBERON:0009835	58.19	gold quality
hypothalamus	UBERON:0001898	55.93	gold quality
primary visual cortex	UBERON:0002436	55.85	gold quality
right frontal lobe	UBERON:0002810	55.82	gold quality
brain	UBERON:0000955	53.03	gold quality
islet of Langerhans	UBERON:0000006	52.98	gold quality
Ammon’s horn	UBERON:0001954	52.20	gold quality
pancreas	UBERON:0001264	51.93	gold quality
amygdala	UBERON:0001876	51.70	gold quality
monocyte	CL:0000576	50.01	silver quality
descending thoracic aorta	UBERON:0002345	49.97	gold quality
substantia nigra	UBERON:0002038	49.88	gold quality
popliteal artery	UBERON:0002250	49.59	gold quality
tibial artery	UBERON:0007610	49.58	gold quality
olfactory segment of nasal mucosa	UBERON:0005386	49.56	gold quality
cortex of kidney	UBERON:0001225	49.19	silver quality
thoracic aorta	UBERON:0001515	48.84	gold quality
duodenum	UBERON:0002114	48.77	silver quality
ascending aorta	UBERON:0001496	48.67	gold quality
multicellular organism	UBERON:0000468	48.64	gold quality
gall bladder	UBERON:0002110	48.45	silver quality
blood	UBERON:0000178	48.38	silver quality

Single-cell (SCXA)

Detected in 1 experiment(s), a significant marker in 1.

Experiment	Marker?	Max mean expression
E-ANND-3	yes	3.61

Regulation

Is transcription factor: no

Cross-species orthologs

0 orthologs

Protein

Non-coding RNA — no protein product; not a drug target.

Function

No curated pathway, Gene-Ontology, or interaction data.

Disease & clinical

No curated disease, variant, or cancer-driver associations.

Drugs & pharmacology

No drug or pharmacology data — not an established drug target.