LINC02860

Summary

LINC02860 (long intergenic non-protein coding RNA 2860, HGNC:22364) is a long non-coding RNA gene on chromosome 7p15.2.

At a glance

• Gene type: non-coding (lncRNA) — no protein product; not a drug target. Variant/disease associations are omitted (they would be positional, from an overlapping protein-coding gene).

Identifiers

Gene identifiers

Field	Value
HGNC ID	HGNC:22364
Approved symbol	LINC02860
Name	long intergenic non-protein coding RNA 2860
Location	7p15.2
Locus type	RNA, long non-coding
Status	Approved
Ensembl gene	ENSG00000222004
Ensembl biotype	lncRNA
Entrez	285941
RNAcentral	URS0000E60B38 — lncRNA, 1958 nt, 1 organism(s)

Gene structure

Transcript identifiers

Ensembl transcripts: 8 — 8 lncRNA

ENST00000409974, ENST00000614528, ENST00000719426, ENST00000719427, ENST00000719428, ENST00000719429, ENST00000719430, ENST00000719431

RefSeq mRNA: 0 — MANE Select: None

Canonical transcript exons

ENST00000409974 — 4 exons

Exon	Start	End
ENSE00001587737	26638495	26639344
ENSE00001587749	26637871	26637936
ENSE00001589914	26646300	26647270
ENSE00003758012	26640696	26640764

Expression profiles

Bgee: expression breadth broad, 41 present calls, max score 90.11.

FANTOM5 (CAGE): breadth tissue_specific, TPM avg 0.1234 / max 44.2274, expressed in 44 samples.

FANTOM5 promoters (1 alternative TSS)

Promoter ID	TPM avg	Samples expressed
77782	0.1234	44

Top tissues by expression

156 total, by Bgee expression score (0-100, higher = more expressed):

Tissue	Anatomy ID	Expression score	Quality
male germ line stem cell (sensu Vertebrata) in testis	CL:0000089 ∩ UBERON:0000473	90.11	gold quality
left testis	UBERON:0004533	63.09	gold quality
right testis	UBERON:0004534	62.92	gold quality
sperm	CL:0000019	60.85	silver quality
testis	UBERON:0000473	60.69	gold quality
hindlimb stylopod muscle	UBERON:0004252	57.06	gold quality
leukocyte	CL:0000738	50.93	silver quality
muscle of leg	UBERON:0001383	50.80	gold quality
monocyte	CL:0000576	50.78	silver quality
skin of hip	UBERON:0001554	47.21	silver quality
vermiform appendix	UBERON:0001154	46.94	gold quality
gastrocnemius	UBERON:0001388	46.05	gold quality
cardia of stomach	UBERON:0001162	45.87	gold quality
body of pancreas	UBERON:0001150	45.49	silver quality
gall bladder	UBERON:0002110	45.12	silver quality
caecum	UBERON:0001153	43.53	silver quality
anatomical system	UBERON:0000467	43.51	gold quality
thyroid gland	UBERON:0002046	43.51	gold quality
lymph node	UBERON:0000029	43.50	silver quality
skeletal muscle tissue of rectus abdominis	UBERON:0004511	43.37	gold quality
material anatomical entity	UBERON:0000465	43.34	gold quality
multicellular organism	UBERON:0000468	43.31	gold quality
right lobe of liver	UBERON:0001114	42.82	silver quality
secondary oocyte	CL:0000655	42.57	gold quality
saliva-secreting gland	UBERON:0001044	42.57	silver quality
tibial artery	UBERON:0007610	42.08	silver quality
cortex of kidney	UBERON:0001225	41.96	silver quality
adult mammalian kidney	UBERON:0000082	41.76	gold quality
bone marrow	UBERON:0002371	41.67	gold quality
ventral tegmental area	UBERON:0002691	41.58	gold quality

Single-cell (SCXA)

Detected in 1 experiment(s), a significant marker in 0.

Experiment	Marker?	Max mean expression
E-ANND-3	no	2.29

Regulation

Is transcription factor: no

Cross-species orthologs

0 orthologs

Protein

Non-coding RNA — no protein product; not a drug target.

Function

No curated pathway, Gene-Ontology, or interaction data.

Disease & clinical

No curated disease, variant, or cancer-driver associations.

Drugs & pharmacology

No drug or pharmacology data — not an established drug target.