LINC02864

Summary

LINC02864 (long intergenic non-protein coding RNA 2864, HGNC:54480) is a long non-coding RNA gene on chromosome 18q22.3.

At a glance

• Gene type: non-coding (lncRNA) — no protein product; not a drug target. Variant/disease associations are omitted (they would be positional, from an overlapping protein-coding gene).

Identifiers

Gene identifiers

Field	Value
HGNC ID	HGNC:54480
Approved symbol	LINC02864
Name	long intergenic non-protein coding RNA 2864
Location	18q22.3
Locus type	RNA, long non-coding
Status	Approved
Aliases	RP11-169F17.1
Ensembl gene	ENSG00000263711
Ensembl biotype	lncRNA
Entrez	400655
RNAcentral	URS000075EA6E — lncRNA, 2674 nt, 1 organism(s)

Gene structure

Transcript identifiers

Ensembl transcripts: 37 — 35 lncRNA, 2 retained_intron

ENST00000581011, ENST00000581862, ENST00000582571, ENST00000583405, ENST00000584544, ENST00000584671, ENST00000654686, ENST00000661525, ENST00000667943, ENST00000669547, ENST00000850060, ENST00000850061, ENST00000850062, ENST00000850063, ENST00000850064, ENST00000850065, ENST00000850066, ENST00000850067, ENST00000850068, ENST00000850069, ENST00000850070, ENST00000850071, ENST00000850072, ENST00000850073, ENST00000850074, ENST00000850075, ENST00000850076, ENST00000850077, ENST00000850078, ENST00000850079, ENST00000850080, ENST00000850081, ENST00000850082, ENST00000850083, ENST00000850084, ENST00000850085, ENST00000850086

RefSeq mRNA: 0 — MANE Select: None

Canonical transcript exons

ENST00000581011 — 6 exons

Exon	Start	End
ENSE00002699321	73159541	73159664
ENSE00002703199	73154058	73155935
ENSE00002717831	73200653	73200789
ENSE00002726065	73264240	73264480
ENSE00003757527	73161824	73161973
ENSE00003760231	73255813	73255918

Expression profiles

Bgee: expression breadth ubiquitous, 140 present calls, max score 83.09.

Top tissues by expression

231 total, by Bgee expression score (0-100, higher = more expressed):

Tissue	Anatomy ID	Expression score	Quality
male germ line stem cell (sensu Vertebrata) in testis	CL:0000089 ∩ UBERON:0000473	83.09	gold quality
primordial germ cell in gonad	CL:0000670 ∩ UBERON:0000991	81.50	gold quality
colonic epithelium	UBERON:0000397	74.48	silver quality
right testis	UBERON:0004534	70.78	gold quality
left testis	UBERON:0004533	70.75	gold quality
testis	UBERON:0000473	69.88	gold quality
sperm	CL:0000019	69.48	gold quality
bone marrow cell	CL:0002092	66.78	silver quality
smooth muscle tissue	UBERON:0001135	66.58	gold quality
right adrenal gland cortex	UBERON:0035827	65.33	gold quality
ganglionic eminence	UBERON:0004023	63.87	gold quality
hindlimb stylopod muscle	UBERON:0004252	63.00	gold quality
granulocyte	CL:0000094	62.66	gold quality
ventricular zone	UBERON:0003053	61.66	gold quality
right adrenal gland	UBERON:0001233	61.43	gold quality
omental fat pad	UBERON:0010414	60.23	gold quality
peritoneum	UBERON:0002358	60.17	gold quality
apex of heart	UBERON:0002098	59.52	gold quality
adipose tissue of abdominal region	UBERON:0007808	59.13	gold quality
right lobe of thyroid gland	UBERON:0001119	59.12	gold quality
buccal mucosa cell	CL:0002336	59.11	gold quality
monocyte	CL:0000576	57.45	gold quality
subcutaneous adipose tissue	UBERON:0002190	56.74	gold quality
right lung	UBERON:0002167	56.44	gold quality
placenta	UBERON:0001987	55.25	gold quality
left lobe of thyroid gland	UBERON:0001120	54.93	gold quality
thyroid gland	UBERON:0002046	54.81	gold quality
heart left ventricle	UBERON:0002084	54.72	gold quality
cardiac ventricle	UBERON:0002082	54.14	gold quality
adipose tissue	UBERON:0001013	54.05	gold quality

Single-cell (SCXA)

Detected in 1 experiment(s), a significant marker in 1.

Experiment	Marker?	Max mean expression
E-ANND-3	yes	6.19

Regulation

Is transcription factor: no

Cross-species orthologs

0 orthologs

Protein

Non-coding RNA — no protein product; not a drug target.

Function

No curated pathway, Gene-Ontology, or interaction data.

Disease & clinical

No curated disease, variant, or cancer-driver associations.

Drugs & pharmacology

No drug or pharmacology data — not an established drug target.