LINC02875

Summary

LINC02875 (long intergenic non-protein coding RNA 2875, HGNC:32699) is a long non-coding RNA gene on chromosome 17q23.2.

At a glance

• Gene type: non-coding (lncRNA) — no protein product; not a drug target. Variant/disease associations are omitted (they would be positional, from an overlapping protein-coding gene).

Identifiers

Gene identifiers

Field	Value
HGNC ID	HGNC:32699
Approved symbol	LINC02875
Name	long intergenic non-protein coding RNA 2875
Location	17q23.2
Locus type	RNA, long non-coding
Status	Approved
Ensembl gene	ENSG00000187013
Ensembl biotype	lncRNA
Entrez	388407
RNAcentral	URS00007D433D — lncRNA, 1530 nt, 1 organism(s)

Gene structure

Transcript identifiers

Ensembl transcripts: 1 — 1 lncRNA

ENST00000623772

RefSeq mRNA: 0 — MANE Select: None

Canonical transcript exons

ENST00000623772 — 1 exons

Exon	Start	End
ENSE00003755955	61411751	61413280

Expression profiles

Bgee: expression breadth ubiquitous, 130 present calls, max score 68.37.

FANTOM5 (CAGE): breadth tissue_specific, TPM avg 0.7980 / max 28.4399, expressed in 112 samples.

FANTOM5 promoters (1 alternative TSS)

Promoter ID	TPM avg	Samples expressed
162099	0.7980	112

Top tissues by expression

222 total, by Bgee expression score (0-100, higher = more expressed):

Tissue	Anatomy ID	Expression score	Quality
right uterine tube	UBERON:0001302	68.37	gold quality
olfactory segment of nasal mucosa	UBERON:0005386	68.24	gold quality
left coronary artery	UBERON:0001626	62.99	gold quality
apex of heart	UBERON:0002098	62.22	gold quality
stromal cell of endometrium	CL:0002255	62.00	gold quality
coronary artery	UBERON:0001621	61.93	gold quality
descending thoracic aorta	UBERON:0002345	61.86	gold quality
skin of hip	UBERON:0001554	61.78	silver quality
right coronary artery	UBERON:0001625	61.61	gold quality
ascending aorta	UBERON:0001496	61.42	gold quality
thoracic aorta	UBERON:0001515	61.42	gold quality
upper lobe of left lung	UBERON:0008952	61.40	gold quality
aorta	UBERON:0000947	61.09	gold quality
popliteal artery	UBERON:0002250	61.06	gold quality
tibial artery	UBERON:0007610	61.01	gold quality
right lung	UBERON:0002167	60.48	gold quality
upper lobe of lung	UBERON:0008948	60.07	gold quality
myocardium	UBERON:0002349	59.47	gold quality
upper leg skin	UBERON:0004262	59.43	silver quality
metanephros cortex	UBERON:0010533	58.30	gold quality
lower esophagus muscularis layer	UBERON:0035833	57.50	gold quality
lower esophagus	UBERON:0013473	57.48	gold quality
endocervix	UBERON:0000458	57.11	gold quality
tendon of biceps brachii	UBERON:0008188	56.82	gold quality
prostate gland	UBERON:0002367	56.18	gold quality
esophagogastric junction muscularis propria	UBERON:0035841	56.02	gold quality
body of uterus	UBERON:0009853	55.24	gold quality
cortex of kidney	UBERON:0001225	54.62	gold quality
right adrenal gland	UBERON:0001233	54.34	gold quality
lung	UBERON:0002048	54.31	gold quality

Single-cell (SCXA)

Detected in 1 experiment(s), a significant marker in 0.

Experiment	Marker?	Max mean expression
E-ANND-3	no	1.21

Regulation

Is transcription factor: no

Literature-anchored findings (GeneRIF, showing 1)

• LINC02875 Upregulation Contributed to Poor Prognosis for the Hepatocellular Carcinoma and Progression for the Cancerous Cells. (PMID:36055279)

Cross-species orthologs

0 orthologs

Protein

Non-coding RNA — no protein product; not a drug target.

Function

No curated pathway, Gene-Ontology, or interaction data.

Disease & clinical

No curated disease, variant, or cancer-driver associations.

Drugs & pharmacology

No drug or pharmacology data — not an established drug target.