LINC02885

Summary

LINC02885 (long intergenic non-protein coding RNA 2885, HGNC:41188) is a long non-coding RNA gene on chromosome 22q12.3.

At a glance

• Gene type: non-coding (lncRNA) — no protein product; not a drug target. Variant/disease associations are omitted (they would be positional, from an overlapping protein-coding gene).

Identifiers

Gene identifiers

Field	Value
HGNC ID	HGNC:41188
Approved symbol	LINC02885
Name	long intergenic non-protein coding RNA 2885
Location	22q12.3
Locus type	RNA, long non-coding
Status	Approved
Ensembl gene	ENSG00000286592
Ensembl biotype	lncRNA
Entrez	101926957
RNAcentral	URS0000A774C0 — lncRNA, 2990 nt, 1 organism(s)

Gene structure

Transcript identifiers

Ensembl transcripts: 17 — 17 lncRNA

ENST00000665218, ENST00000668433, ENST00000700833, ENST00000754702, ENST00000754703, ENST00000754704, ENST00000754705, ENST00000754706, ENST00000754707, ENST00000754708, ENST00000754709, ENST00000754710, ENST00000754711, ENST00000801714, ENST00000801715, ENST00000801716, ENST00000801717

RefSeq mRNA: 0 — MANE Select: None

Canonical transcript exons

ENST00000665218 — 3 exons

Exon	Start	End
ENSE00003852362	34884141	34884223
ENSE00003871160	34873405	34873919
ENSE00003876754	34893774	34893847

Expression profiles

Bgee: expression breadth broad, 100 present calls, max score 82.74.

FANTOM5 (CAGE): breadth tissue_specific, TPM avg 0.1392 / max 14.3536, expressed in 55 samples.

FANTOM5 promoters (2 alternative TSS)

Promoter ID	TPM avg	Samples expressed
193785	0.0916	41
193784	0.0476	28

Top tissues by expression

206 total, by Bgee expression score (0-100, higher = more expressed):

Tissue	Anatomy ID	Expression score	Quality
secondary oocyte	CL:0000655	82.74	gold quality
male germ line stem cell (sensu Vertebrata) in testis	CL:0000089 ∩ UBERON:0000473	79.69	gold quality
tibialis anterior	UBERON:0001385	74.24	silver quality
mucosa of transverse colon	UBERON:0004991	69.71	gold quality
oocyte	CL:0000023	68.63	gold quality
buccal mucosa cell	CL:0002336	67.30	gold quality
pancreatic ductal cell	CL:0002079	67.22	silver quality
cortical plate	UBERON:0005343	66.43	gold quality
prefrontal cortex	UBERON:0000451	65.76	gold quality
ileal mucosa	UBERON:0000331	65.22	silver quality
hindlimb stylopod muscle	UBERON:0004252	63.94	gold quality
anterior cingulate cortex	UBERON:0009835	63.85	gold quality
Brodmann (1909) area 9	UBERON:0013540	63.85	gold quality
right frontal lobe	UBERON:0002810	62.31	gold quality
ganglionic eminence	UBERON:0004023	61.40	gold quality
hypothalamus	UBERON:0001898	60.94	gold quality
neocortex	UBERON:0001950	60.56	gold quality
dorsolateral prefrontal cortex	UBERON:0009834	60.53	gold quality
frontal cortex	UBERON:0001870	60.35	gold quality
deltoid	UBERON:0001476	60.22	gold quality
right hemisphere of cerebellum	UBERON:0014890	59.96	gold quality
cerebellar hemisphere	UBERON:0002245	57.59	gold quality
cerebral cortex	UBERON:0000956	57.12	gold quality
nasal cavity epithelium	UBERON:0005384	56.16	gold quality
myocardium	UBERON:0002349	56.06	gold quality
epithelial cell of pancreas	CL:0000083	55.53	gold quality
cardiac muscle of right atrium	UBERON:0003379	54.34	gold quality
left ventricle myocardium	UBERON:0006566	54.23	gold quality
kidney epithelium	UBERON:0004819	53.93	gold quality
islet of Langerhans	UBERON:0000006	53.57	gold quality

Regulation

Is transcription factor: no

Cross-species orthologs

0 orthologs

Protein

Non-coding RNA — no protein product; not a drug target.

Function

No curated pathway, Gene-Ontology, or interaction data.

Disease & clinical

No curated disease, variant, or cancer-driver associations.

Drugs & pharmacology

No drug or pharmacology data — not an established drug target.