LINC02887

Summary

LINC02887 (long intergenic non-protein coding RNA 2887, HGNC:55047) is a long non-coding RNA gene on chromosome 17p13.3.

At a glance

• Gene type: non-coding (lncRNA) — no protein product; not a drug target. Variant/disease associations are omitted (they would be positional, from an overlapping protein-coding gene).

Identifiers

Gene identifiers

Field	Value
HGNC ID	HGNC:55047
Approved symbol	LINC02887
Name	long intergenic non-protein coding RNA 2887
Location	17p13.3
Locus type	RNA, long non-coding
Status	Approved
Ensembl gene	ENSG00000280279
Ensembl biotype	lncRNA
Entrez	105377826
RNAcentral	URS00007DFE59 — lncRNA, 2096 nt, 1 organism(s)

Gene structure

Transcript identifiers

Ensembl transcripts: 1 — 1 lncRNA

ENST00000623180

RefSeq mRNA: 0 — MANE Select: None

Canonical transcript exons

ENST00000623180 — 5 exons

Exon	Start	End
ENSE00003755230	65830	65887
ENSE00003755749	75814	75878
ENSE00003756616	71366	71556
ENSE00003756684	76723	76866
ENSE00003759547	64099	65736

Expression profiles

Bgee: expression breadth ubiquitous, 131 present calls, max score 91.75.

Top tissues by expression

131 total, by Bgee expression score (0-100, higher = more expressed):

Tissue	Anatomy ID	Expression score	Quality
blood	UBERON:0000178	91.75	gold quality
granulocyte	CL:0000094	85.27	gold quality
bone marrow cell	CL:0002092	85.13	gold quality
bone marrow	UBERON:0002371	84.92	gold quality
spleen	UBERON:0002106	79.98	gold quality
male germ line stem cell (sensu Vertebrata) in testis	CL:0000089 ∩ UBERON:0000473	79.01	gold quality
primordial germ cell in gonad	CL:0000670 ∩ UBERON:0000991	78.27	silver quality
colonic epithelium	UBERON:0000397	77.97	gold quality
right testis	UBERON:0004534	77.48	gold quality
apex of heart	UBERON:0002098	77.12	gold quality
left testis	UBERON:0004533	77.11	gold quality
testis	UBERON:0000473	76.27	gold quality
esophagus mucosa	UBERON:0002469	75.70	gold quality
hindlimb stylopod muscle	UBERON:0004252	75.20	gold quality
right lung	UBERON:0002167	74.95	gold quality
upper lobe of left lung	UBERON:0008952	74.77	gold quality
mucosa of stomach	UBERON:0001199	74.50	gold quality
leukocyte	CL:0000738	74.37	gold quality
monocyte	CL:0000576	74.27	gold quality
lower esophagus mucosa	UBERON:0035834	73.01	gold quality
lung	UBERON:0002048	72.66	gold quality
vermiform appendix	UBERON:0001154	72.41	gold quality
esophagus	UBERON:0001043	71.67	gold quality
left ovary	UBERON:0002119	71.47	gold quality
body of pancreas	UBERON:0001150	71.14	gold quality
right uterine tube	UBERON:0001302	71.13	gold quality
skin of leg	UBERON:0001511	70.54	gold quality
ovary	UBERON:0000992	70.29	gold quality
descending thoracic aorta	UBERON:0002345	70.12	gold quality
right ovary	UBERON:0002118	69.97	gold quality

Single-cell (SCXA)

Detected in 1 experiment(s), a significant marker in 0.

Experiment	Marker?	Max mean expression
E-ANND-3	no	0.79

Regulation

Is transcription factor: no

Cross-species orthologs

0 orthologs

Protein

Non-coding RNA — no protein product; not a drug target.

Function

No curated pathway, Gene-Ontology, or interaction data.

Disease & clinical

No curated disease, variant, or cancer-driver associations.

Drugs & pharmacology

No drug or pharmacology data — not an established drug target.