LINC02890

Summary

LINC02890 (long intergenic non-protein coding RNA 2890, HGNC:55220) is a long non-coding RNA gene on chromosome 16p12.2.

At a glance

• Gene type: non-coding (lncRNA) — no protein product; not a drug target. Variant/disease associations are omitted (they would be positional, from an overlapping protein-coding gene).

Identifiers

Gene identifiers

Field	Value
HGNC ID	HGNC:55220
Approved symbol	LINC02890
Name	long intergenic non-protein coding RNA 2890
Location	16p12.2
Locus type	RNA, long non-coding
Status	Approved
Ensembl gene	ENSG00000260905
Ensembl biotype	lncRNA
Entrez	118568814
RNAcentral	URS00026A1FB2 — lncRNA, 2422 nt, 1 organism(s)

Gene structure

Transcript identifiers

Ensembl transcripts: 1 — 1 lncRNA

ENST00000566098

RefSeq mRNA: 0 — MANE Select: None

Canonical transcript exons

ENST00000566098 — 2 exons

Exon	Start	End
ENSE00002611880	22612543	22612887
ENSE00002615607	22613454	22613483

Expression profiles

Bgee: expression breadth ubiquitous, 109 present calls, max score 84.77.

Top tissues by expression

109 total, by Bgee expression score (0-100, higher = more expressed):

Tissue	Anatomy ID	Expression score	Quality
male germ line stem cell (sensu Vertebrata) in testis	CL:0000089 ∩ UBERON:0000473	84.77	gold quality
bone marrow cell	CL:0002092	81.41	gold quality
gall bladder	UBERON:0002110	72.90	gold quality
colonic epithelium	UBERON:0000397	69.74	silver quality
ganglionic eminence	UBERON:0004023	68.98	gold quality
lymph node	UBERON:0000029	68.62	gold quality
ventricular zone	UBERON:0003053	68.28	gold quality
cortical plate	UBERON:0005343	67.62	gold quality
mucosa of transverse colon	UBERON:0004991	66.48	gold quality
body of pancreas	UBERON:0001150	64.65	gold quality
monocyte	CL:0000576	63.96	gold quality
pancreas	UBERON:0001264	63.58	gold quality
liver	UBERON:0002107	61.22	gold quality
leukocyte	CL:0000738	61.15	gold quality
prefrontal cortex	UBERON:0000451	60.92	gold quality
blood	UBERON:0000178	60.25	gold quality
right lobe of liver	UBERON:0001114	59.10	gold quality
fundus of stomach	UBERON:0001160	59.04	gold quality
cerebellum	UBERON:0002037	58.84	gold quality
cerebellar cortex	UBERON:0002129	58.83	gold quality
cerebellar hemisphere	UBERON:0002245	58.51	gold quality
granulocyte	CL:0000094	58.16	gold quality
superior frontal gyrus	UBERON:0002661	57.84	gold quality
placenta	UBERON:0001987	57.70	gold quality
cortex of kidney	UBERON:0001225	57.65	gold quality
spleen	UBERON:0002106	57.30	gold quality
muscle of leg	UBERON:0001383	57.22	gold quality
right adrenal gland	UBERON:0001233	56.29	gold quality
gastrocnemius	UBERON:0001388	56.20	gold quality
right hemisphere of cerebellum	UBERON:0014890	55.98	gold quality

Single-cell (SCXA)

Detected in 1 experiment(s), a significant marker in 0.

Experiment	Marker?	Max mean expression
E-ANND-3	no	0.22

Regulation

Is transcription factor: no

Cross-species orthologs

0 orthologs

Protein

Non-coding RNA — no protein product; not a drug target.

Function

No curated pathway, Gene-Ontology, or interaction data.

Disease & clinical

No curated disease, variant, or cancer-driver associations.

Drugs & pharmacology

No drug or pharmacology data — not an established drug target.