LINC02897

Summary

LINC02897 (long intergenic non-protein coding RNA 2897, HGNC:33759) is a long non-coding RNA gene on chromosome 1q44.

At a glance

• Gene type: non-coding (lncRNA) — no protein product; not a drug target. Variant/disease associations are omitted (they would be positional, from an overlapping protein-coding gene).

Identifiers

Gene identifiers

Field	Value
HGNC ID	HGNC:33759
Approved symbol	LINC02897
Name	long intergenic non-protein coding RNA 2897
Location	1q44
Locus type	RNA, long non-coding
Status	Approved
Aliases	FLJ45717
Ensembl gene	ENSG00000221953
Ensembl biotype	lncRNA
Entrez	388759
RNAcentral	URS0001BBE411 — lncRNA, 2263 nt, 1 organism(s)

Gene structure

Transcript identifiers

Ensembl transcripts: 2 — 2 lncRNA

ENST00000623686, ENST00000810527

RefSeq mRNA: 0 — MANE Select: None

Canonical transcript exons

ENST00000623686 — 1 exons

Exon	Start	End
ENSE00001567690	247110160	247112417

Expression profiles

Bgee: expression breadth ubiquitous, 119 present calls, max score 74.59.

Top tissues by expression

119 total, by Bgee expression score (0-100, higher = more expressed):

Tissue	Anatomy ID	Expression score	Quality
male germ line stem cell (sensu Vertebrata) in testis	CL:0000089 ∩ UBERON:0000473	74.59	gold quality
ganglionic eminence	UBERON:0004023	60.88	gold quality
ventricular zone	UBERON:0003053	60.57	gold quality
cortical plate	UBERON:0005343	60.52	silver quality
skeletal muscle tissue	UBERON:0001134	59.52	gold quality
cerebellar cortex	UBERON:0002129	59.39	gold quality
cerebellar hemisphere	UBERON:0002245	59.38	gold quality
cerebellum	UBERON:0002037	59.31	gold quality
hindlimb stylopod muscle	UBERON:0004252	59.00	gold quality
right hemisphere of cerebellum	UBERON:0014890	58.26	gold quality
primary visual cortex	UBERON:0002436	56.83	gold quality
hypothalamus	UBERON:0001898	56.12	gold quality
stromal cell of endometrium	CL:0002255	56.10	gold quality
body of uterus	UBERON:0009853	55.93	gold quality
myometrium	UBERON:0001296	55.34	gold quality
substantia nigra	UBERON:0002038	55.31	gold quality
apex of heart	UBERON:0002098	55.19	gold quality
amygdala	UBERON:0001876	54.92	gold quality
temporal lobe	UBERON:0001871	54.86	gold quality
muscle of leg	UBERON:0001383	54.68	gold quality
left ovary	UBERON:0002119	54.49	gold quality
anterior cingulate cortex	UBERON:0009835	54.21	gold quality
ovary	UBERON:0000992	54.17	gold quality
prefrontal cortex	UBERON:0000451	54.09	gold quality
brain	UBERON:0000955	54.06	gold quality
urinary bladder	UBERON:0001255	54.04	gold quality
gastrocnemius	UBERON:0001388	54.00	gold quality
Ammon’s horn	UBERON:0001954	53.87	gold quality
Brodmann (1909) area 9	UBERON:0013540	53.86	gold quality
C1 segment of cervical spinal cord	UBERON:0006469	53.81	gold quality

Single-cell (SCXA)

Detected in 1 experiment(s), a significant marker in 0.

Experiment	Marker?	Max mean expression
E-ANND-3	no	1.43

Regulation

Is transcription factor: no

Cross-species orthologs

0 orthologs

Protein

Non-coding RNA — no protein product; not a drug target.

Function

No curated pathway, Gene-Ontology, or interaction data.

Disease & clinical

No curated disease, variant, or cancer-driver associations.

Drugs & pharmacology

No drug or pharmacology data — not an established drug target.