LINC02899

Summary

LINC02899 (long intergenic non-protein coding RNA 2899, HGNC:26630) is a long non-coding RNA gene on chromosome 5p14.2.

At a glance

• Gene type: non-coding (lncRNA) — no protein product; not a drug target. Variant/disease associations are omitted (they would be positional, from an overlapping protein-coding gene).

Identifiers

Gene identifiers

Field	Value
HGNC ID	HGNC:26630
Approved symbol	LINC02899
Name	long intergenic non-protein coding RNA 2899
Location	5p14.2
Locus type	RNA, long non-coding
Status	Approved
Aliases	FLJ34836
Ensembl gene	ENSG00000248874
Ensembl biotype	lncRNA
Entrez	439936
RNAcentral	URS00008121C5 — lncRNA, 2003 nt, 1 organism(s)

Gene structure

Transcript identifiers

Ensembl transcripts: 4 — 4 lncRNA

ENST00000507936, ENST00000512559, ENST00000779573, ENST00000779574

RefSeq mRNA: 0 — MANE Select: None

Canonical transcript exons

ENST00000507936 — 4 exons

Exon	Start	End
ENSE00002047316	23951564	23951803
ENSE00002053269	23977790	23977922
ENSE00002072298	23979937	23979986
ENSE00002078459	23975997	23976050

Expression profiles

Bgee: expression breadth ubiquitous, 140 present calls, max score 81.69.

Top tissues by expression

227 total, by Bgee expression score (0-100, higher = more expressed):

Tissue	Anatomy ID	Expression score	Quality
primordial germ cell in gonad	CL:0000670 ∩ UBERON:0000991	81.69	gold quality
male germ line stem cell (sensu Vertebrata) in testis	CL:0000089 ∩ UBERON:0000473	80.63	gold quality
bone marrow cell	CL:0002092	68.79	silver quality
ventricular zone	UBERON:0003053	67.72	gold quality
right hemisphere of cerebellum	UBERON:0014890	65.44	gold quality
cortical plate	UBERON:0005343	61.99	gold quality
ganglionic eminence	UBERON:0004023	60.15	gold quality
leukocyte	CL:0000738	58.53	gold quality
monocyte	CL:0000576	57.46	gold quality
cerebellar hemisphere	UBERON:0002245	56.33	gold quality
islet of Langerhans	UBERON:0000006	54.90	gold quality
muscle of leg	UBERON:0001383	54.71	gold quality
cerebellar cortex	UBERON:0002129	54.70	gold quality
placenta	UBERON:0001987	54.57	gold quality
right lobe of liver	UBERON:0001114	54.40	gold quality
gastrocnemius	UBERON:0001388	54.18	gold quality
smooth muscle tissue	UBERON:0001135	53.15	gold quality
pancreas	UBERON:0001264	52.94	gold quality
left adrenal gland cortex	UBERON:0035825	51.84	gold quality
cortex of kidney	UBERON:0001225	51.35	gold quality
body of pancreas	UBERON:0001150	51.29	gold quality
left adrenal gland	UBERON:0001234	51.04	gold quality
hindlimb stylopod muscle	UBERON:0004252	50.70	gold quality
vermiform appendix	UBERON:0001154	50.60	gold quality
duodenum	UBERON:0002114	50.48	gold quality
adrenal gland	UBERON:0002369	50.31	gold quality
popliteal artery	UBERON:0002250	49.74	gold quality
tibial artery	UBERON:0007610	49.63	gold quality
adrenal cortex	UBERON:0001235	49.39	gold quality
mucosa of transverse colon	UBERON:0004991	49.09	gold quality

Single-cell (SCXA)

Detected in 2 experiment(s), a significant marker in 0.

Experiment	Marker?	Max mean expression
E-MTAB-11268	no	672.71
E-ANND-3	no	2.41

Regulation

Is transcription factor: no

Cross-species orthologs

0 orthologs

Protein

Non-coding RNA — no protein product; not a drug target.

Function

No curated pathway, Gene-Ontology, or interaction data.

Disease & clinical

No curated disease, variant, or cancer-driver associations.

Drugs & pharmacology

No drug or pharmacology data — not an established drug target.