LINC02916

Summary

LINC02916 (long intergenic non-protein coding RNA 2916, HGNC:55574) is a long non-coding RNA gene on chromosome 10q11.21.

At a glance

• Gene type: non-coding (lncRNA) — no protein product; not a drug target. Variant/disease associations are omitted (they would be positional, from an overlapping protein-coding gene).

Identifiers

Gene identifiers

Field	Value
HGNC ID	HGNC:55574
Approved symbol	LINC02916
Name	long intergenic non-protein coding RNA 2916
Location	10q11.21
Locus type	RNA, long non-coding
Status	Approved
Aliases	TCONS_00018175
Ensembl gene	ENSG00000230555
Ensembl biotype	lncRNA
Entrez	124902415
RNAcentral	URS00026A1A1D — lncRNA, 2181 nt, 1 organism(s)

Gene structure

Transcript identifiers

Ensembl transcripts: 4 — 4 lncRNA

ENST00000442526, ENST00000745706, ENST00000745707, ENST00000745708

RefSeq mRNA: 0 — MANE Select: None

Canonical transcript exons

ENST00000442526 — 2 exons

Exon	Start	End
ENSE00004085840	43421670	43422116
ENSE00004085841	43420556	43421066

Expression profiles

Bgee: expression breadth ubiquitous, 131 present calls, max score 81.10.

Top tissues by expression

131 total, by Bgee expression score (0-100, higher = more expressed):

Tissue	Anatomy ID	Expression score	Quality
male germ line stem cell (sensu Vertebrata) in testis	CL:0000089 ∩ UBERON:0000473	81.10	gold quality
skeletal muscle tissue	UBERON:0001134	79.86	gold quality
muscle of leg	UBERON:0001383	79.14	gold quality
primordial germ cell in gonad	CL:0000670 ∩ UBERON:0000991	79.00	gold quality
gastrocnemius	UBERON:0001388	78.65	gold quality
hindlimb stylopod muscle	UBERON:0004252	77.97	gold quality
apex of heart	UBERON:0002098	74.30	gold quality
stromal cell of endometrium	CL:0002255	73.30	gold quality
heart left ventricle	UBERON:0002084	71.91	gold quality
colonic epithelium	UBERON:0000397	71.62	silver quality
granulocyte	CL:0000094	70.64	gold quality
heart	UBERON:0000948	70.32	gold quality
right atrium auricular region	UBERON:0006631	69.72	gold quality
anterior cingulate cortex	UBERON:0009835	69.70	gold quality
nucleus accumbens	UBERON:0001882	69.30	gold quality
gall bladder	UBERON:0002110	69.23	gold quality
smooth muscle tissue	UBERON:0001135	69.22	gold quality
right adrenal gland	UBERON:0001233	69.01	gold quality
left adrenal gland	UBERON:0001234	69.00	gold quality
left adrenal gland cortex	UBERON:0035825	68.73	gold quality
leukocyte	CL:0000738	68.62	gold quality
right adrenal gland cortex	UBERON:0035827	68.43	gold quality
monocyte	CL:0000576	68.29	gold quality
adrenal gland	UBERON:0002369	68.23	gold quality
urinary bladder	UBERON:0001255	68.17	gold quality
temporal lobe	UBERON:0001871	68.10	gold quality
amygdala	UBERON:0001876	68.08	gold quality
ventricular zone	UBERON:0003053	67.96	gold quality
mucosa of stomach	UBERON:0001199	67.90	gold quality
caudate nucleus	UBERON:0001873	67.84	gold quality

Single-cell (SCXA)

Detected in 2 experiment(s), a significant marker in 0.

Experiment	Marker?	Max mean expression
E-HCAD-30	no	96.84
E-ANND-3	no	0.62

Regulation

Is transcription factor: no

Cross-species orthologs

0 orthologs

Protein

Non-coding RNA — no protein product; not a drug target.

Function

No curated pathway, Gene-Ontology, or interaction data.

Disease & clinical

No curated disease, variant, or cancer-driver associations.

Drugs & pharmacology

No drug or pharmacology data — not an established drug target.