LINC02925

Summary

LINC02925 (long intergenic non-protein coding RNA 2925, HGNC:55756) is a long non-coding RNA gene on chromosome 22q13.31.

At a glance

• Gene type: non-coding (lncRNA) — no protein product; not a drug target. Variant/disease associations are omitted (they would be positional, from an overlapping protein-coding gene).

Identifiers

Gene identifiers

Field	Value
HGNC ID	HGNC:55756
Approved symbol	LINC02925
Name	long intergenic non-protein coding RNA 2925
Location	22q13.31
Locus type	RNA, long non-coding
Status	Approved
Aliases	RP3-439F8.1
Ensembl gene	ENSG00000234869
Ensembl biotype	lncRNA
Entrez	122149302
RNAcentral	URS00026A27FE — lncRNA, 2950 nt, 1 organism(s)

Gene structure

Transcript identifiers

Ensembl transcripts: 18 — 18 lncRNA

ENST00000426112, ENST00000688081, ENST00000716472, ENST00000716473, ENST00000716479, ENST00000716480, ENST00000815158, ENST00000815159, ENST00000815160, ENST00000815161, ENST00000815162, ENST00000815163, ENST00000815164, ENST00000815165, ENST00000815166, ENST00000815167, ENST00000815168, ENST00000815169

RefSeq mRNA: 0 — MANE Select: None

Canonical transcript exons

ENST00000426112 — 2 exons

Exon	Start	End
ENSE00001601431	46541495	46542934
ENSE00004029861	46546688	46548196

Expression profiles

Bgee: expression breadth ubiquitous, 110 present calls, max score 78.97.

Top tissues by expression

208 total, by Bgee expression score (0-100, higher = more expressed):

Tissue	Anatomy ID	Expression score	Quality
pancreatic ductal cell	CL:0002079	78.97	silver quality
sperm	CL:0000019	77.19	gold quality
tibialis anterior	UBERON:0001385	73.98	silver quality
apex of heart	UBERON:0002098	73.98	gold quality
epithelial cell of pancreas	CL:0000083	71.84	gold quality
heart right ventricle	UBERON:0002080	71.39	silver quality
olfactory segment of nasal mucosa	UBERON:0005386	70.23	gold quality
secondary oocyte	CL:0000655	69.74	gold quality
heart left ventricle	UBERON:0002084	69.54	gold quality
cardiac ventricle	UBERON:0002082	69.44	gold quality
upper arm skin	UBERON:0004263	68.76	gold quality
bronchial epithelial cell	CL:0002328	68.58	silver quality
heart	UBERON:0000948	68.11	gold quality
bronchus	UBERON:0002185	67.93	silver quality
nasal cavity epithelium	UBERON:0005384	67.69	gold quality
cardiac atrium	UBERON:0002081	66.73	gold quality
right atrium auricular region	UBERON:0006631	66.58	gold quality
ventricular zone	UBERON:0003053	66.52	gold quality
nasal cavity mucosa	UBERON:0001826	66.45	gold quality
bone marrow cell	CL:0002092	66.12	silver quality
tendon of biceps brachii	UBERON:0008188	66.08	gold quality
skeletal muscle tissue of rectus abdominis	UBERON:0004511	65.49	gold quality
ileal mucosa	UBERON:0000331	65.36	gold quality
right uterine tube	UBERON:0001302	65.36	gold quality
endothelial cell	CL:0000115	64.01	gold quality
deltoid	UBERON:0001476	63.86	gold quality
tendon	UBERON:0000043	63.77	gold quality
oviduct epithelium	UBERON:0004804	63.64	silver quality
tibial nerve	UBERON:0001323	63.61	gold quality
cartilage tissue	UBERON:0002418	63.54	gold quality

Single-cell (SCXA)

Detected in 1 experiment(s), a significant marker in 1.

Experiment	Marker?	Max mean expression
E-ANND-3	yes	2.78

Regulation

Is transcription factor: no

Literature-anchored findings (GeneRIF, showing 1)

• The lncRNA RP3-439F8.1 promotes GBM cell proliferation and progression by sponging miR-139-5p to upregulate NR5A2. (PMID:33991848)

Cross-species orthologs

0 orthologs

Protein

Non-coding RNA — no protein product; not a drug target.

Function

No curated pathway, Gene-Ontology, or interaction data.

Disease & clinical

No curated disease, variant, or cancer-driver associations.

Drugs & pharmacology

No drug or pharmacology data — not an established drug target.