LINC02928

Summary

LINC02928 (long intergenic non-protein coding RNA 2928, HGNC:55799) is a long non-coding RNA gene on chromosome 4q12.

At a glance

• Gene type: non-coding (lncRNA) — no protein product; not a drug target. Variant/disease associations are omitted (they would be positional, from an overlapping protein-coding gene).

Identifiers

Gene identifiers

Field	Value
HGNC ID	HGNC:55799
Approved symbol	LINC02928
Name	long intergenic non-protein coding RNA 2928
Location	4q12
Locus type	RNA, long non-coding
Status	Approved
Ensembl gene	ENSG00000273257
Ensembl biotype	lncRNA
Entrez	105377659
RNAcentral	URS00021EF8E0 — lncRNA, 2663 nt, 1 organism(s)

Gene structure

Transcript identifiers

Ensembl transcripts: 4 — 4 lncRNA

ENST00000609511, ENST00000679834, ENST00000681396, ENST00000681925

RefSeq mRNA: 0 — MANE Select: None

Canonical transcript exons

ENST00000609511 — 1 exons

Exon	Start	End
ENSE00003709768	55387949	55388271

Expression profiles

Bgee: expression breadth ubiquitous, 124 present calls, max score 93.75.

Top tissues by expression

124 total, by Bgee expression score (0-100, higher = more expressed):

Tissue	Anatomy ID	Expression score	Quality
primordial germ cell in gonad	CL:0000670 ∩ UBERON:0000991	93.75	gold quality
male germ line stem cell (sensu Vertebrata) in testis	CL:0000089 ∩ UBERON:0000473	90.56	gold quality
C1 segment of cervical spinal cord	UBERON:0006469	78.31	gold quality
putamen	UBERON:0001874	75.87	gold quality
cortical plate	UBERON:0005343	75.82	gold quality
substantia nigra	UBERON:0002038	75.50	gold quality
Brodmann (1909) area 9	UBERON:0013540	74.43	gold quality
amygdala	UBERON:0001876	74.39	gold quality
Ammon’s horn	UBERON:0001954	74.28	gold quality
nucleus accumbens	UBERON:0001882	73.92	gold quality
endometrium	UBERON:0001295	73.16	gold quality
caudate nucleus	UBERON:0001873	72.14	gold quality
tibial nerve	UBERON:0001323	71.77	gold quality
ventricular zone	UBERON:0003053	71.69	gold quality
hypothalamus	UBERON:0001898	71.14	gold quality
cerebral cortex	UBERON:0000956	71.11	gold quality
dorsolateral prefrontal cortex	UBERON:0009834	71.09	gold quality
prefrontal cortex	UBERON:0000451	70.60	gold quality
right frontal lobe	UBERON:0002810	70.58	gold quality
frontal cortex	UBERON:0001870	70.42	gold quality
brain	UBERON:0000955	69.92	gold quality
anterior cingulate cortex	UBERON:0009835	69.74	gold quality
ganglionic eminence	UBERON:0004023	69.63	gold quality
skeletal muscle tissue	UBERON:0001134	69.41	gold quality
olfactory segment of nasal mucosa	UBERON:0005386	68.38	gold quality
muscle of leg	UBERON:0001383	68.13	gold quality
gastrocnemius	UBERON:0001388	67.80	gold quality
cerebellar cortex	UBERON:0002129	67.77	gold quality
right hemisphere of cerebellum	UBERON:0014890	67.75	gold quality
cerebellar hemisphere	UBERON:0002245	67.74	gold quality

Single-cell (SCXA)

Detected in 1 experiment(s), a significant marker in 0.

Experiment	Marker?	Max mean expression
E-ANND-3	no	0.97

Regulation

Is transcription factor: no

Cross-species orthologs

0 orthologs

Protein

Non-coding RNA — no protein product; not a drug target.

Function

No curated pathway, Gene-Ontology, or interaction data.

Disease & clinical

No curated disease, variant, or cancer-driver associations.

Drugs & pharmacology

No drug or pharmacology data — not an established drug target.