LINC02935

Summary

LINC02935 (long intergenic non-protein coding RNA 2935, HGNC:55939) is a long non-coding RNA gene on chromosome 10q25.2.

At a glance

• Gene type: non-coding (lncRNA) — no protein product; not a drug target. Variant/disease associations are omitted (they would be positional, from an overlapping protein-coding gene).

Identifiers

Gene identifiers

Field	Value
HGNC ID	HGNC:55939
Approved symbol	LINC02935
Name	long intergenic non-protein coding RNA 2935
Location	10q25.2
Locus type	RNA, long non-coding
Status	Approved
Aliases	AL158212.1
Ensembl gene	ENSG00000225292
Ensembl biotype	lncRNA
Entrez	107984158
RNAcentral	URS0002A5B3E3 — lncRNA, 2443 nt, 1 organism(s)

Gene structure

Transcript identifiers

Ensembl transcripts: 8 — 8 lncRNA

ENST00000428766, ENST00000785198, ENST00000785199, ENST00000785200, ENST00000785201, ENST00000785202, ENST00000785203, ENST00000785204

RefSeq mRNA: 0 — MANE Select: None

Canonical transcript exons

ENST00000428766 — 8 exons

Exon	Start	End
ENSE00001665746	112890966	112891072
ENSE00004160795	112944259	112944799
ENSE00004160796	112941079	112941159
ENSE00004160799	112888733	112888807
ENSE00004160802	112946267	112946416
ENSE00004160803	112905977	112906213
ENSE00004160805	112945495	112945604
ENSE00004160807	112948362	112948482

Expression profiles

Bgee: expression breadth ubiquitous, 120 present calls, max score 85.67.

Top tissues by expression

120 total, by Bgee expression score (0-100, higher = more expressed):

Tissue	Anatomy ID	Expression score	Quality
male germ line stem cell (sensu Vertebrata) in testis	CL:0000089 ∩ UBERON:0000473	85.67	gold quality
cortical plate	UBERON:0005343	74.39	gold quality
ganglionic eminence	UBERON:0004023	72.55	gold quality
ventricular zone	UBERON:0003053	72.09	gold quality
bone marrow cell	CL:0002092	70.97	silver quality
corpus callosum	UBERON:0002336	67.68	gold quality
olfactory segment of nasal mucosa	UBERON:0005386	66.63	gold quality
placenta	UBERON:0001987	66.21	gold quality
gall bladder	UBERON:0002110	65.36	gold quality
bone marrow	UBERON:0002371	65.31	gold quality
skeletal muscle tissue	UBERON:0001134	62.19	silver quality
monocyte	CL:0000576	62.00	gold quality
descending thoracic aorta	UBERON:0002345	61.58	gold quality
mucosa of stomach	UBERON:0001199	61.23	gold quality
prefrontal cortex	UBERON:0000451	61.04	gold quality
calcaneal tendon	UBERON:0003701	60.92	gold quality
smooth muscle tissue	UBERON:0001135	60.64	gold quality
urinary bladder	UBERON:0001255	60.55	gold quality
blood	UBERON:0000178	60.53	gold quality
islet of Langerhans	UBERON:0000006	60.40	gold quality
popliteal artery	UBERON:0002250	60.10	gold quality
tibial artery	UBERON:0007610	60.07	gold quality
ectocervix	UBERON:0012249	59.16	gold quality
pancreas	UBERON:0001264	58.97	gold quality
uterine cervix	UBERON:0000002	58.89	gold quality
body of pancreas	UBERON:0001150	58.42	gold quality
body of uterus	UBERON:0009853	58.22	gold quality
thoracic aorta	UBERON:0001515	58.04	gold quality
muscle of leg	UBERON:0001383	57.96	gold quality
subcutaneous adipose tissue	UBERON:0002190	57.95	gold quality

Single-cell (SCXA)

Detected in 1 experiment(s), a significant marker in 0.

Experiment	Marker?	Max mean expression
E-ANND-3	no	1.59

Regulation

Is transcription factor: no

Cross-species orthologs

0 orthologs

Protein

Non-coding RNA — no protein product; not a drug target.

Function

No curated pathway, Gene-Ontology, or interaction data.

Disease & clinical

No curated disease, variant, or cancer-driver associations.

Drugs & pharmacology

No drug or pharmacology data — not an established drug target.