LINC02936

Summary

LINC02936 (long intergenic non-protein coding RNA 2936, HGNC:55940) is a long non-coding RNA gene on chromosome 2q14.1.

At a glance

• Gene type: non-coding (lncRNA) — no protein product; not a drug target. Variant/disease associations are omitted (they would be positional, from an overlapping protein-coding gene).

Identifiers

Gene identifiers

Field	Value
HGNC ID	HGNC:55940
Approved symbol	LINC02936
Name	long intergenic non-protein coding RNA 2936
Location	2q14.1
Locus type	RNA, long non-coding
Status	Approved
Aliases	AC017074.1
Ensembl gene	ENSG00000227359
Ensembl biotype	lncRNA
Entrez	123464517
RNAcentral	URS00023396D9 — lncRNA, 657 nt, 1 organism(s)

Gene structure

Transcript identifiers

Ensembl transcripts: 5 — 5 lncRNA

ENST00000424612, ENST00000834697, ENST00000834698, ENST00000834699, ENST00000834700

RefSeq mRNA: 0 — MANE Select: None

Canonical transcript exons

ENST00000424612 — 3 exons

Exon	Start	End
ENSE00001618525	113703697	113704078
ENSE00001705428	113688161	113688257
ENSE00001746012	113677702	113677783

Expression profiles

Bgee: expression breadth ubiquitous, 128 present calls, max score 86.43.

Top tissues by expression

128 total, by Bgee expression score (0-100, higher = more expressed):

Tissue	Anatomy ID	Expression score	Quality
primordial germ cell in gonad	CL:0000670 ∩ UBERON:0000991	86.43	gold quality
male germ line stem cell (sensu Vertebrata) in testis	CL:0000089 ∩ UBERON:0000473	83.20	gold quality
rectum	UBERON:0001052	71.59	gold quality
mucosa of transverse colon	UBERON:0004991	68.16	gold quality
left adrenal gland	UBERON:0001234	66.88	gold quality
left adrenal gland cortex	UBERON:0035825	66.33	gold quality
right adrenal gland	UBERON:0001233	65.70	gold quality
adrenal gland	UBERON:0002369	65.33	gold quality
right adrenal gland cortex	UBERON:0035827	64.59	gold quality
colonic epithelium	UBERON:0000397	64.52	silver quality
transverse colon	UBERON:0001157	63.76	gold quality
ganglionic eminence	UBERON:0004023	63.29	gold quality
bone marrow cell	CL:0002092	63.09	silver quality
bone marrow	UBERON:0002371	62.68	gold quality
lymph node	UBERON:0000029	62.35	gold quality
skeletal muscle tissue	UBERON:0001134	62.22	gold quality
metanephros cortex	UBERON:0010533	62.00	gold quality
granulocyte	CL:0000094	61.92	gold quality
muscle of leg	UBERON:0001383	61.54	gold quality
liver	UBERON:0002107	61.49	gold quality
duodenum	UBERON:0002114	61.29	gold quality
gastrocnemius	UBERON:0001388	61.23	gold quality
olfactory segment of nasal mucosa	UBERON:0005386	60.82	gold quality
adult mammalian kidney	UBERON:0000082	60.58	gold quality
cortex of kidney	UBERON:0001225	60.45	gold quality
smooth muscle tissue	UBERON:0001135	60.33	gold quality
islet of Langerhans	UBERON:0000006	60.14	gold quality
right coronary artery	UBERON:0001625	60.12	gold quality
left lobe of thyroid gland	UBERON:0001120	60.01	gold quality
kidney	UBERON:0002113	59.79	gold quality

Single-cell (SCXA)

Detected in 1 experiment(s), a significant marker in 0.

Experiment	Marker?	Max mean expression
E-ANND-3	no	1.17

Regulation

Is transcription factor: no

Cross-species orthologs

0 orthologs

Protein

Non-coding RNA — no protein product; not a drug target.

Function

No curated pathway, Gene-Ontology, or interaction data.

Disease & clinical

No curated disease, variant, or cancer-driver associations.

Drugs & pharmacology

No drug or pharmacology data — not an established drug target.