LINC02947

Summary

LINC02947 (long intergenic non-protein coding RNA 2947, HGNC:55962) is a long non-coding RNA gene on chromosome 8q11.21.

At a glance

• Gene type: non-coding (lncRNA) — no protein product; not a drug target. Variant/disease associations are omitted (they would be positional, from an overlapping protein-coding gene).

Identifiers

Gene identifiers

Field	Value
HGNC ID	HGNC:55962
Approved symbol	LINC02947
Name	long intergenic non-protein coding RNA 2947
Location	8q11.21
Locus type	RNA, long non-coding
Status	Approved
Ensembl gene	ENSG00000253140
Ensembl biotype	lncRNA
Entrez	105375822
RNAcentral	URS00026A1CF2 — lncRNA, 745 nt, 1 organism(s)

Gene structure

Transcript identifiers

Ensembl transcripts: 4 — 4 lncRNA

ENST00000521359, ENST00000665034, ENST00000793349, ENST00000793350

RefSeq mRNA: 0 — MANE Select: None

Canonical transcript exons

ENST00000521359 — 3 exons

Exon	Start	End
ENSE00002125469	48517058	48517214
ENSE00004176152	48518000	48518088
ENSE00004176154	48515846	48516356

Expression profiles

Bgee: expression breadth broad, 83 present calls, max score 95.95.

Top tissues by expression

83 total, by Bgee expression score (0-100, higher = more expressed):

Tissue	Anatomy ID	Expression score	Quality
primordial germ cell in gonad	CL:0000670 ∩ UBERON:0000991	95.95	gold quality
male germ line stem cell (sensu Vertebrata) in testis	CL:0000089 ∩ UBERON:0000473	84.47	gold quality
tonsil	UBERON:0002372	69.90	gold quality
lymph node	UBERON:0000029	65.23	gold quality
vermiform appendix	UBERON:0001154	61.72	gold quality
colonic epithelium	UBERON:0000397	61.22	silver quality
prefrontal cortex	UBERON:0000451	58.15	gold quality
urinary bladder	UBERON:0001255	57.78	gold quality
liver	UBERON:0002107	53.13	silver quality
bone marrow	UBERON:0002371	52.26	silver quality
monocyte	CL:0000576	52.07	gold quality
cortex of kidney	UBERON:0001225	51.41	silver quality
blood	UBERON:0000178	51.25	gold quality
islet of Langerhans	UBERON:0000006	51.12	gold quality
olfactory segment of nasal mucosa	UBERON:0005386	49.92	gold quality
granulocyte	CL:0000094	49.16	silver quality
adrenal gland	UBERON:0002369	48.33	gold quality
placenta	UBERON:0001987	48.06	gold quality
colon	UBERON:0001155	46.96	gold quality
spleen	UBERON:0002106	46.81	gold quality
calcaneal tendon	UBERON:0003701	46.64	silver quality
muscle of leg	UBERON:0001383	46.00	silver quality
gastrocnemius	UBERON:0001388	45.71	silver quality
intestine	UBERON:0000160	45.64	gold quality
multicellular organism	UBERON:0000468	45.43	gold quality
left coronary artery	UBERON:0001626	44.93	gold quality
left uterine tube	UBERON:0001303	44.63	gold quality
small intestine	UBERON:0002108	44.27	gold quality
cerebellar hemisphere	UBERON:0002245	44.06	silver quality
right lobe of liver	UBERON:0001114	43.90	silver quality

Single-cell (SCXA)

Detected in 1 experiment(s), a significant marker in 0.

Experiment	Marker?	Max mean expression
E-ANND-3	no	0.64

Regulation

Is transcription factor: no

Cross-species orthologs

0 orthologs

Protein

Non-coding RNA — no protein product; not a drug target.

Function

No curated pathway, Gene-Ontology, or interaction data.

Disease & clinical

No curated disease, variant, or cancer-driver associations.

Drugs & pharmacology

No drug or pharmacology data — not an established drug target.