LINC02948

Summary

LINC02948 (long intergenic non-protein coding RNA 2948, HGNC:55963) is a long non-coding RNA gene on chromosome 8p12.

At a glance

• Gene type: non-coding (lncRNA) — no protein product; not a drug target. Variant/disease associations are omitted (they would be positional, from an overlapping protein-coding gene).

Identifiers

Gene identifiers

Field	Value
HGNC ID	HGNC:55963
Approved symbol	LINC02948
Name	long intergenic non-protein coding RNA 2948
Location	8p12
Locus type	RNA, long non-coding
Status	Approved
Ensembl gene	ENSG00000253182
Ensembl biotype	lncRNA
Entrez	105379351
RNAcentral	URS0002A3DAC3 — lncRNA, 1190 nt, 1 organism(s)

Gene structure

Transcript identifiers

Ensembl transcripts: 18 — 18 lncRNA

ENST00000522028, ENST00000798110, ENST00000798111, ENST00000798112, ENST00000798113, ENST00000798114, ENST00000798115, ENST00000798116, ENST00000798117, ENST00000798118, ENST00000798119, ENST00000798120, ENST00000798121, ENST00000798122, ENST00000798123, ENST00000798124, ENST00000798125, ENST00000798126

RefSeq mRNA: 0 — MANE Select: None

Canonical transcript exons

ENST00000522028 — 2 exons

Exon	Start	End
ENSE00002118490	29548171	29548413
ENSE00002135653	29564021	29564341

Expression profiles

Bgee: expression breadth broad, 50 present calls, max score 73.69.

Top tissues by expression

50 total, by Bgee expression score (0-100, higher = more expressed):

Tissue	Anatomy ID	Expression score	Quality
cerebellar hemisphere	UBERON:0002245	73.69	gold quality
myometrium	UBERON:0001296	63.76	gold quality
blood	UBERON:0000178	58.04	gold quality
vermiform appendix	UBERON:0001154	56.40	gold quality
islet of Langerhans	UBERON:0000006	56.35	gold quality
monocyte	CL:0000576	55.97	gold quality
gall bladder	UBERON:0002110	55.73	gold quality
placenta	UBERON:0001987	55.31	gold quality
endometrium	UBERON:0001295	54.35	silver quality
pituitary gland	UBERON:0000007	52.72	gold quality
tibial artery	UBERON:0007610	52.59	gold quality
olfactory segment of nasal mucosa	UBERON:0005386	52.33	gold quality
bone marrow	UBERON:0002371	51.98	silver quality
body of pancreas	UBERON:0001150	51.72	gold quality
amygdala	UBERON:0001876	49.55	gold quality
rectum	UBERON:0001052	46.64	gold quality
gastrocnemius	UBERON:0001388	46.09	silver quality
smooth muscle tissue	UBERON:0001135	45.30	gold quality
heart left ventricle	UBERON:0002084	45.23	gold quality
colon	UBERON:0001155	44.84	gold quality
left adrenal gland	UBERON:0001234	44.65	gold quality
spleen	UBERON:0002106	44.52	silver quality
muscle layer of sigmoid colon	UBERON:0035805	43.50	silver quality
subcutaneous adipose tissue	UBERON:0002190	43.08	gold quality
minor salivary gland	UBERON:0001830	43.05	gold quality
skin of abdomen	UBERON:0001416	42.78	gold quality
esophagus mucosa	UBERON:0002469	42.59	silver quality
liver	UBERON:0002107	42.55	silver quality
adipose tissue	UBERON:0001013	42.37	silver quality
ascending aorta	UBERON:0001496	42.06	silver quality

Single-cell (SCXA)

Detected in 1 experiment(s), a significant marker in 0.

Experiment	Marker?	Max mean expression
E-ANND-3	no	1.31

Regulation

Is transcription factor: no

Cross-species orthologs

0 orthologs

Protein

Non-coding RNA — no protein product; not a drug target.

Function

No curated pathway, Gene-Ontology, or interaction data.

Disease & clinical

No curated disease, variant, or cancer-driver associations.

Drugs & pharmacology

No drug or pharmacology data — not an established drug target.