LINC02954

Summary

LINC02954 (long intergenic non-protein coding RNA 2954, HGNC:55972) is a long non-coding RNA gene on chromosome 11q12.2.

At a glance

• Gene type: non-coding (lncRNA) — no protein product; not a drug target. Variant/disease associations are omitted (they would be positional, from an overlapping protein-coding gene).

Identifiers

Gene identifiers

Field	Value
HGNC ID	HGNC:55972
Approved symbol	LINC02954
Name	long intergenic non-protein coding RNA 2954
Location	11q12.2
Locus type	RNA, long non-coding
Status	Approved
Ensembl gene	ENSG00000256733
Ensembl biotype	lncRNA
Entrez	123466205
RNAcentral	URS00026A20FA — lncRNA, 563 nt, 1 organism(s)

Gene structure

Transcript identifiers

Ensembl transcripts: 3 — 3 lncRNA

ENST00000536495, ENST00000659437, ENST00000664141

RefSeq mRNA: 0 — MANE Select: None

Canonical transcript exons

ENST00000536495 — 4 exons

Exon	Start	End
ENSE00002206045	61055737	61055793
ENSE00002239135	61061711	61061875
ENSE00002266774	61067431	61067535
ENSE00002302679	61061302	61061426

Expression profiles

Bgee: expression breadth broad, 84 present calls, max score 68.17.

Top tissues by expression

84 total, by Bgee expression score (0-100, higher = more expressed):

Tissue	Anatomy ID	Expression score	Quality
bone marrow cell	CL:0002092	68.17	silver quality
bone marrow	UBERON:0002371	62.87	gold quality
lymph node	UBERON:0000029	57.39	gold quality
liver	UBERON:0002107	56.59	gold quality
tonsil	UBERON:0002372	56.18	gold quality
granulocyte	CL:0000094	55.90	gold quality
islet of Langerhans	UBERON:0000006	55.90	gold quality
olfactory segment of nasal mucosa	UBERON:0005386	55.34	gold quality
urinary bladder	UBERON:0001255	55.02	gold quality
monocyte	CL:0000576	53.81	gold quality
blood	UBERON:0000178	53.80	gold quality
vermiform appendix	UBERON:0001154	53.11	gold quality
prefrontal cortex	UBERON:0000451	51.21	gold quality
esophagus mucosa	UBERON:0002469	51.17	gold quality
esophagus	UBERON:0001043	50.39	gold quality
cortex of kidney	UBERON:0001225	49.86	gold quality
pancreas	UBERON:0001264	48.67	gold quality
gastrocnemius	UBERON:0001388	47.29	silver quality
tibial artery	UBERON:0007610	46.71	gold quality
body of pancreas	UBERON:0001150	46.56	silver quality
amygdala	UBERON:0001876	46.35	gold quality
heart left ventricle	UBERON:0002084	45.98	gold quality
lower esophagus muscularis layer	UBERON:0035833	45.95	gold quality
right lobe of liver	UBERON:0001114	45.59	silver quality
lower esophagus mucosa	UBERON:0035834	45.11	silver quality
left coronary artery	UBERON:0001626	44.58	gold quality
adult mammalian kidney	UBERON:0000082	44.51	silver quality
lung	UBERON:0002048	44.37	gold quality
ovary	UBERON:0000992	44.03	silver quality
smooth muscle tissue	UBERON:0001135	43.86	gold quality

Single-cell (SCXA)

Detected in 1 experiment(s), a significant marker in 0.

Experiment	Marker?	Max mean expression
E-ANND-3	no	1.46

Regulation

Is transcription factor: no

Cross-species orthologs

0 orthologs

Protein

Non-coding RNA — no protein product; not a drug target.

Function

No curated pathway, Gene-Ontology, or interaction data.

Disease & clinical

No curated disease, variant, or cancer-driver associations.

Drugs & pharmacology

No drug or pharmacology data — not an established drug target.