LINC02957

Summary

LINC02957 (long intergenic non-protein coding RNA 2957, HGNC:55977) is a long non-coding RNA gene on chromosome 9q22.2.

At a glance

• Gene type: non-coding (lncRNA) — no protein product; not a drug target. Variant/disease associations are omitted (they would be positional, from an overlapping protein-coding gene).

Identifiers

Gene identifiers

Field	Value
HGNC ID	HGNC:55977
Approved symbol	LINC02957
Name	long intergenic non-protein coding RNA 2957
Location	9q22.2
Locus type	RNA, long non-coding
Status	Approved
Ensembl gene	ENSG00000260454
Ensembl biotype	lncRNA
Entrez	105376144
RNAcentral	URS00026A21E6 — lncRNA, 793 nt, 1 organism(s)

Gene structure

Transcript identifiers

Ensembl transcripts: 10 — 10 lncRNA

ENST00000563268, ENST00000653201, ENST00000655562, ENST00000655868, ENST00000661568, ENST00000662091, ENST00000815989, ENST00000815990, ENST00000815991, ENST00000815992

RefSeq mRNA: 0 — MANE Select: None

Canonical transcript exons

ENST00000563268 — 3 exons

Exon	Start	End
ENSE00002586380	90997596	90997817
ENSE00002600916	91000770	91001871
ENSE00002619316	90997054	90997124

Expression profiles

Bgee: expression breadth broad, 88 present calls, max score 80.20.

Top tissues by expression

88 total, by Bgee expression score (0-100, higher = more expressed):

Tissue	Anatomy ID	Expression score	Quality
male germ line stem cell (sensu Vertebrata) in testis	CL:0000089 ∩ UBERON:0000473	80.20	silver quality
primordial germ cell in gonad	CL:0000670 ∩ UBERON:0000991	79.77	silver quality
sural nerve	UBERON:0015488	70.74	gold quality
stromal cell of endometrium	CL:0002255	66.25	gold quality
skin of leg	UBERON:0001511	65.36	gold quality
zone of skin	UBERON:0000014	64.89	gold quality
skin of abdomen	UBERON:0001416	64.37	gold quality
skeletal muscle tissue	UBERON:0001134	58.42	silver quality
monocyte	CL:0000576	56.96	gold quality
liver	UBERON:0002107	56.01	gold quality
right lobe of liver	UBERON:0001114	53.69	gold quality
islet of Langerhans	UBERON:0000006	53.02	gold quality
multicellular organism	UBERON:0000468	52.63	gold quality
testis	UBERON:0000473	51.43	silver quality
lymph node	UBERON:0000029	50.87	silver quality
olfactory segment of nasal mucosa	UBERON:0005386	50.27	gold quality
blood	UBERON:0000178	49.93	gold quality
bone marrow	UBERON:0002371	49.42	silver quality
adrenal tissue	UBERON:0018303	49.10	gold quality
prefrontal cortex	UBERON:0000451	48.49	silver quality
subcutaneous adipose tissue	UBERON:0002190	48.12	gold quality
muscle of leg	UBERON:0001383	48.07	gold quality
adipose tissue	UBERON:0001013	47.82	gold quality
placenta	UBERON:0001987	47.80	gold quality
duodenum	UBERON:0002114	47.77	silver quality
gastrocnemius	UBERON:0001388	47.76	silver quality
endometrium	UBERON:0001295	47.69	gold quality
omental fat pad	UBERON:0010414	47.24	gold quality
myometrium	UBERON:0001296	47.00	gold quality
smooth muscle tissue	UBERON:0001135	46.54	gold quality

Single-cell (SCXA)

Detected in 1 experiment(s), a significant marker in 1.

Experiment	Marker?	Max mean expression
E-ANND-3	yes	2.61

Regulation

Is transcription factor: no

Cross-species orthologs

0 orthologs

Protein

Non-coding RNA — no protein product; not a drug target.

Function

No curated pathway, Gene-Ontology, or interaction data.

Disease & clinical

No curated disease, variant, or cancer-driver associations.

Drugs & pharmacology

No drug or pharmacology data — not an established drug target.