LINC02960

Summary

LINC02960 (long intergenic non-protein coding RNA 2960, HGNC:55985) is a long non-coding RNA gene on chromosome 14q32.11.

At a glance

• Gene type: non-coding (lncRNA) — no protein product; not a drug target. Variant/disease associations are omitted (they would be positional, from an overlapping protein-coding gene).

Identifiers

Gene identifiers

Field	Value
HGNC ID	HGNC:55985
Approved symbol	LINC02960
Name	long intergenic non-protein coding RNA 2960
Location	14q32.11
Locus type	RNA, long non-coding
Status	Approved
Ensembl gene	ENSG00000275198
Ensembl biotype	lncRNA
Entrez	123466210
RNAcentral	URS0002A2B4D0 — lncRNA, 5191 nt, 1 organism(s)

Gene structure

Transcript identifiers

Ensembl transcripts: 3 — 3 lncRNA

ENST00000615251, ENST00000740670, ENST00000740671

RefSeq mRNA: 0 — MANE Select: None

Canonical transcript exons

ENST00000615251 — 1 exons

Exon	Start	End
ENSE00004077062	90382783	90387973

Expression profiles

Bgee: expression breadth ubiquitous, 121 present calls, max score 79.07.

Top tissues by expression

220 total, by Bgee expression score (0-100, higher = more expressed):

Tissue	Anatomy ID	Expression score	Quality
primordial germ cell in gonad	CL:0000670 ∩ UBERON:0000991	79.07	gold quality
colonic epithelium	UBERON:0000397	77.71	gold quality
male germ line stem cell (sensu Vertebrata) in testis	CL:0000089 ∩ UBERON:0000473	74.46	gold quality
sural nerve	UBERON:0015488	73.09	silver quality
bone marrow cell	CL:0002092	67.36	silver quality
tibialis anterior	UBERON:0001385	65.54	silver quality
kidney epithelium	UBERON:0004819	64.14	gold quality
cortical plate	UBERON:0005343	58.73	silver quality
ventricular zone	UBERON:0003053	58.34	silver quality
ganglionic eminence	UBERON:0004023	56.80	silver quality
deltoid	UBERON:0001476	56.71	gold quality
upper arm skin	UBERON:0004263	56.01	gold quality
vena cava	UBERON:0004087	55.98	gold quality
sperm	CL:0000019	55.96	gold quality
islet of Langerhans	UBERON:0000006	55.38	gold quality
ileal mucosa	UBERON:0000331	55.19	silver quality
endothelial cell	CL:0000115	54.96	gold quality
pancreatic ductal cell	CL:0002079	54.74	silver quality
muscle of leg	UBERON:0001383	54.44	gold quality
gastrocnemius	UBERON:0001388	54.38	gold quality
cardiac muscle of right atrium	UBERON:0003379	54.34	gold quality
left ventricle myocardium	UBERON:0006566	54.23	gold quality
epithelial cell of pancreas	CL:0000083	54.01	gold quality
esophagus squamous epithelium	UBERON:0006920	53.01	gold quality
leukocyte	CL:0000738	52.84	silver quality
testis	UBERON:0000473	52.80	gold quality
right testis	UBERON:0004534	52.18	gold quality
left testis	UBERON:0004533	52.13	gold quality
quadriceps femoris	UBERON:0001377	51.94	gold quality
right lobe of liver	UBERON:0001114	51.55	gold quality

Single-cell (SCXA)

Detected in 1 experiment(s), a significant marker in 1.

Experiment	Marker?	Max mean expression
E-ANND-3	yes	5.02

Regulation

Is transcription factor: no

Cross-species orthologs

0 orthologs

Protein

Non-coding RNA — no protein product; not a drug target.

Function

No curated pathway, Gene-Ontology, or interaction data.

Disease & clinical

No curated disease, variant, or cancer-driver associations.

Drugs & pharmacology

No drug or pharmacology data — not an established drug target.