LINC02963

Summary

LINC02963 (long intergenic non-protein coding RNA 2963, HGNC:53945) is a long non-coding RNA gene on chromosome 12p11.1.

At a glance

• Gene type: non-coding (lncRNA) — no protein product; not a drug target. Variant/disease associations are omitted (they would be positional, from an overlapping protein-coding gene).

Identifiers

Gene identifiers

Field	Value
HGNC ID	HGNC:53945
Approved symbol	LINC02963
Name	long intergenic non-protein coding RNA 2963
Location	12p11.1
Locus type	RNA, long non-coding
Status	Approved
Aliases	lncRNA-p3134
Ensembl gene	ENSG00000255652
Ensembl biotype	lncRNA
Entrez	123706542
RNAcentral	URS00026A1D6B — lncRNA, 821 nt, 1 organism(s)

Gene structure

Transcript identifiers

Ensembl transcripts: 18 — 18 lncRNA

ENST00000545923, ENST00000656327, ENST00000660987, ENST00000662756, ENST00000666454, ENST00000700811, ENST00000813262, ENST00000813263, ENST00000813264, ENST00000813265, ENST00000813266, ENST00000813267, ENST00000813268, ENST00000813269, ENST00000813270, ENST00000813271, ENST00000813272, ENST00000813273

RefSeq mRNA: 0 — MANE Select: None

Canonical transcript exons

ENST00000545923 — 4 exons

Exon	Start	End
ENSE00002286641	34211874	34212021
ENSE00002516895	34202457	34202582
ENSE00004213162	34191033	34191432
ENSE00004213164	34218781	34218937

Expression profiles

Bgee: expression breadth ubiquitous, 122 present calls, max score 82.10.

Top tissues by expression

122 total, by Bgee expression score (0-100, higher = more expressed):

Tissue	Anatomy ID	Expression score	Quality
male germ line stem cell (sensu Vertebrata) in testis	CL:0000089 ∩ UBERON:0000473	82.10	gold quality
primordial germ cell in gonad	CL:0000670 ∩ UBERON:0000991	79.75	gold quality
skeletal muscle tissue	UBERON:0001134	66.69	gold quality
right testis	UBERON:0004534	66.53	gold quality
testis	UBERON:0000473	65.48	gold quality
ganglionic eminence	UBERON:0004023	65.45	gold quality
left testis	UBERON:0004533	65.12	gold quality
apex of heart	UBERON:0002098	61.29	gold quality
superior frontal gyrus	UBERON:0002661	60.96	gold quality
Brodmann (1909) area 9	UBERON:0013540	60.23	gold quality
dorsolateral prefrontal cortex	UBERON:0009834	60.17	gold quality
spleen	UBERON:0002106	60.10	gold quality
right frontal lobe	UBERON:0002810	59.87	gold quality
frontal cortex	UBERON:0001870	59.30	gold quality
prefrontal cortex	UBERON:0000451	58.48	gold quality
thyroid gland	UBERON:0002046	58.39	gold quality
hindlimb stylopod muscle	UBERON:0004252	58.20	gold quality
primary visual cortex	UBERON:0002436	57.95	gold quality
cerebral cortex	UBERON:0000956	57.92	gold quality
left lobe of thyroid gland	UBERON:0001120	57.92	gold quality
anterior cingulate cortex	UBERON:0009835	57.49	gold quality
cortex of kidney	UBERON:0001225	57.15	gold quality
endocervix	UBERON:0000458	57.12	gold quality
right lobe of thyroid gland	UBERON:0001119	56.95	gold quality
bone marrow	UBERON:0002371	56.79	gold quality
muscle of leg	UBERON:0001383	56.61	gold quality
vermiform appendix	UBERON:0001154	56.41	gold quality
heart left ventricle	UBERON:0002084	56.18	gold quality
islet of Langerhans	UBERON:0000006	55.90	gold quality
pancreas	UBERON:0001264	55.72	gold quality

Single-cell (SCXA)

Detected in 1 experiment(s), a significant marker in 0.

Experiment	Marker?	Max mean expression
E-ANND-3	no	1.12

Regulation

Is transcription factor: no

Cross-species orthologs

0 orthologs

Protein

Non-coding RNA — no protein product; not a drug target.

Function

No curated pathway, Gene-Ontology, or interaction data.

Disease & clinical

No curated disease, variant, or cancer-driver associations.

Drugs & pharmacology

No drug or pharmacology data — not an established drug target.