LINC02964

Summary

LINC02964 (long intergenic non-protein coding RNA 2964, HGNC:53487) is a long non-coding RNA gene on chromosome 8q24.13.

At a glance

• Gene type: non-coding (lncRNA) — no protein product; not a drug target. Variant/disease associations are omitted (they would be positional, from an overlapping protein-coding gene).

Identifiers

Gene identifiers

Field	Value
HGNC ID	HGNC:53487
Approved symbol	LINC02964
Name	long intergenic non-protein coding RNA 2964
Location	8q24.13
Locus type	RNA, long non-coding
Status	Approved
Ensembl gene	ENSG00000286122
Ensembl biotype	lncRNA
Entrez	105375746
RNAcentral	URS0000E65310 — lncRNA, 3061 nt, 1 organism(s)

Gene structure

Transcript identifiers

Ensembl transcripts: 4 — 4 lncRNA

ENST00000651999, ENST00000652177, ENST00000816149, ENST00000843601

RefSeq mRNA: 0 — MANE Select: None

Canonical transcript exons

ENST00000651999 — 8 exons

Exon	Start	End
ENSE00003841969	125953072	125955592
ENSE00003842269	125886838	125886905
ENSE00003842659	125725748	125725888
ENSE00003844618	125648327	125648331
ENSE00003844863	125650233	125650273
ENSE00003845294	125649982	125650034
ENSE00003849086	125942572	125942691
ENSE00003851080	125679933	125680044

Expression profiles

Bgee: expression breadth ubiquitous, 121 present calls, max score 80.29.

Top tissues by expression

121 total, by Bgee expression score (0-100, higher = more expressed):

Tissue	Anatomy ID	Expression score	Quality
male germ line stem cell (sensu Vertebrata) in testis	CL:0000089 ∩ UBERON:0000473	80.29	silver quality
bone marrow cell	CL:0002092	72.96	gold quality
ventricular zone	UBERON:0003053	69.31	gold quality
blood	UBERON:0000178	66.35	gold quality
bone marrow	UBERON:0002371	62.41	gold quality
primordial germ cell in gonad	CL:0000670 ∩ UBERON:0000991	61.97	silver quality
lymph node	UBERON:0000029	61.77	gold quality
cortical plate	UBERON:0005343	60.70	silver quality
vermiform appendix	UBERON:0001154	60.59	gold quality
granulocyte	CL:0000094	60.44	gold quality
spleen	UBERON:0002106	58.79	gold quality
tonsil	UBERON:0002372	57.41	gold quality
ganglionic eminence	UBERON:0004023	56.78	silver quality
sural nerve	UBERON:0015488	56.38	silver quality
leukocyte	CL:0000738	54.93	gold quality
calcaneal tendon	UBERON:0003701	53.78	silver quality
right uterine tube	UBERON:0001302	53.57	gold quality
monocyte	CL:0000576	53.09	gold quality
liver	UBERON:0002107	53.08	gold quality
lung	UBERON:0002048	52.88	gold quality
upper lobe of left lung	UBERON:0008952	52.80	gold quality
cortex of kidney	UBERON:0001225	52.64	gold quality
small intestine Peyer’s patch	UBERON:0003454	52.04	gold quality
small intestine	UBERON:0002108	51.92	gold quality
duodenum	UBERON:0002114	51.65	gold quality
hindlimb stylopod muscle	UBERON:0004252	50.89	gold quality
mucosa of transverse colon	UBERON:0004991	50.75	gold quality
right lobe of liver	UBERON:0001114	50.68	gold quality
omental fat pad	UBERON:0010414	50.36	gold quality
prefrontal cortex	UBERON:0000451	49.96	gold quality

Single-cell (SCXA)

Detected in 1 experiment(s), a significant marker in 0.

Experiment	Marker?	Max mean expression
E-ANND-3	no	4.02

Regulation

Is transcription factor: no

Cross-species orthologs

0 orthologs

Protein

Non-coding RNA — no protein product; not a drug target.

Function

No curated pathway, Gene-Ontology, or interaction data.

Disease & clinical

No curated disease, variant, or cancer-driver associations.

Drugs & pharmacology

No drug or pharmacology data — not an established drug target.