LINC02966

Summary

LINC02966 (long intergenic non-protein coding RNA 2966, HGNC:56006) is a long non-coding RNA gene on chromosome 2q14.1.

At a glance

• Gene type: non-coding (lncRNA) — no protein product; not a drug target. Variant/disease associations are omitted (they would be positional, from an overlapping protein-coding gene).

Identifiers

Gene identifiers

Field	Value
HGNC ID	HGNC:56006
Approved symbol	LINC02966
Name	long intergenic non-protein coding RNA 2966
Location	2q14.1
Locus type	RNA, long non-coding
Status	Approved
Aliases	AC016745.3
Ensembl gene	ENSG00000234997
Ensembl biotype	lncRNA
Entrez	101927400
RNAcentral	URS00026A2446 — lncRNA, 1862 nt, 1 organism(s)

Gene structure

Transcript identifiers

Ensembl transcripts: 48 — 48 lncRNA

ENST00000422178, ENST00000653674, ENST00000688639, ENST00000690999, ENST00000691381, ENST00000700925, ENST00000803912, ENST00000803913, ENST00000803914, ENST00000803915, ENST00000803916, ENST00000803917, ENST00000803918, ENST00000803919, ENST00000803920, ENST00000803921, ENST00000803922, ENST00000803923, ENST00000803924, ENST00000803925, ENST00000803926, ENST00000803927, ENST00000803928, ENST00000803929, ENST00000803930, ENST00000803931, ENST00000803932, ENST00000803933, ENST00000803934, ENST00000803935, ENST00000803936, ENST00000803937, ENST00000803938, ENST00000803939, ENST00000803940, ENST00000803941, ENST00000803942, ENST00000803943, ENST00000803944, ENST00000803945, ENST00000803946, ENST00000803947, ENST00000803948, ENST00000803949, ENST00000803950, ENST00000803951, ENST00000803952, ENST00000803953

RefSeq mRNA: 0 — MANE Select: None

Canonical transcript exons

ENST00000422178 — 2 exons

Exon	Start	End
ENSE00001737822	113424495	113424575
ENSE00001758547	113424898	113425324

Expression profiles

Bgee: expression breadth ubiquitous, 132 present calls, max score 74.61.

Top tissues by expression

132 total, by Bgee expression score (0-100, higher = more expressed):

Tissue	Anatomy ID	Expression score	Quality
monocyte	CL:0000576	74.61	gold quality
right hemisphere of cerebellum	UBERON:0014890	74.08	gold quality
leukocyte	CL:0000738	73.95	gold quality
corpus callosum	UBERON:0002336	73.93	gold quality
right lobe of thyroid gland	UBERON:0001119	73.11	gold quality
right adrenal gland cortex	UBERON:0035827	73.07	gold quality
skin of abdomen	UBERON:0001416	72.60	gold quality
thyroid gland	UBERON:0002046	72.58	gold quality
superior frontal gyrus	UBERON:0002661	72.54	gold quality
cerebellar cortex	UBERON:0002129	72.53	gold quality
cerebellar hemisphere	UBERON:0002245	72.50	gold quality
cerebellum	UBERON:0002037	72.46	gold quality
zone of skin	UBERON:0000014	72.36	gold quality
left lobe of thyroid gland	UBERON:0001120	72.32	gold quality
skin of leg	UBERON:0001511	71.94	gold quality
left adrenal gland cortex	UBERON:0035825	71.36	gold quality
left adrenal gland	UBERON:0001234	71.18	gold quality
right adrenal gland	UBERON:0001233	70.39	gold quality
esophagus mucosa	UBERON:0002469	69.67	gold quality
adrenal gland	UBERON:0002369	69.52	gold quality
primary visual cortex	UBERON:0002436	68.19	gold quality
right frontal lobe	UBERON:0002810	68.07	gold quality
tonsil	UBERON:0002372	67.29	gold quality
bone marrow cell	CL:0002092	66.84	silver quality
right uterine tube	UBERON:0001302	66.70	gold quality
Brodmann (1909) area 9	UBERON:0013540	66.66	gold quality
frontal cortex	UBERON:0001870	66.48	gold quality
lymph node	UBERON:0000029	66.34	gold quality
cortical plate	UBERON:0005343	65.90	gold quality
blood	UBERON:0000178	65.78	gold quality

Single-cell (SCXA)

Detected in 2 experiment(s), a significant marker in 1.

Experiment	Marker?	Max mean expression
E-HCAD-35	yes	57.48
E-ANND-3	no	0.92

Regulation

Is transcription factor: no

Cross-species orthologs

0 orthologs

Protein

Non-coding RNA — no protein product; not a drug target.

Function

No curated pathway, Gene-Ontology, or interaction data.

Disease & clinical

No curated disease, variant, or cancer-driver associations.

Drugs & pharmacology

No drug or pharmacology data — not an established drug target.