LINC02971

Summary

LINC02971 (long intergenic non-protein coding RNA 2971, HGNC:56012) is a long non-coding RNA gene on chromosome 1q42.3.

At a glance

• Gene type: non-coding (lncRNA) — no protein product; not a drug target. Variant/disease associations are omitted (they would be positional, from an overlapping protein-coding gene).

Identifiers

Gene identifiers

Field	Value
HGNC ID	HGNC:56012
Approved symbol	LINC02971
Name	long intergenic non-protein coding RNA 2971
Location	1q42.3
Locus type	RNA, long non-coding
Status	Approved
Aliases	AL391832.1
Ensembl gene	ENSG00000237520
Ensembl biotype	lncRNA
Entrez	123706537
RNAcentral	URS00026A24DF — lncRNA, 455 nt, 1 organism(s)

Gene structure

Transcript identifiers

Ensembl transcripts: 8 — 8 lncRNA

ENST00000423963, ENST00000702311, ENST00000850464, ENST00000850465, ENST00000850466, ENST00000850467, ENST00000850468, ENST00000850469

RefSeq mRNA: 0 — MANE Select: None

Canonical transcript exons

ENST00000423963 — 4 exons

Exon	Start	End
ENSE00001678202	234957231	234957360
ENSE00001762205	234959697	234959989
ENSE00004281932	234953871	234953979
ENSE00004281934	234955107	234955204

Expression profiles

Bgee: expression breadth broad, 99 present calls, max score 75.68.

Top tissues by expression

99 total, by Bgee expression score (0-100, higher = more expressed):

Tissue	Anatomy ID	Expression score	Quality
bone marrow cell	CL:0002092	75.68	gold quality
bone marrow	UBERON:0002371	72.81	gold quality
blood	UBERON:0000178	72.00	gold quality
urinary bladder	UBERON:0001255	69.75	gold quality
gall bladder	UBERON:0002110	65.95	gold quality
right lobe of liver	UBERON:0001114	64.37	gold quality
liver	UBERON:0002107	64.26	gold quality
lymph node	UBERON:0000029	63.98	gold quality
monocyte	CL:0000576	63.90	gold quality
leukocyte	CL:0000738	63.41	gold quality
prefrontal cortex	UBERON:0000451	60.98	gold quality
olfactory segment of nasal mucosa	UBERON:0005386	60.16	gold quality
islet of Langerhans	UBERON:0000006	60.11	gold quality
vermiform appendix	UBERON:0001154	59.68	gold quality
rectum	UBERON:0001052	59.50	gold quality
cortex of kidney	UBERON:0001225	59.45	gold quality
mucosa of transverse colon	UBERON:0004991	58.11	gold quality
fallopian tube	UBERON:0003889	56.62	gold quality
calcaneal tendon	UBERON:0003701	56.22	gold quality
right lung	UBERON:0002167	56.13	gold quality
right coronary artery	UBERON:0001625	55.75	gold quality
myometrium	UBERON:0001296	55.23	gold quality
muscle of leg	UBERON:0001383	55.13	gold quality
multicellular organism	UBERON:0000468	54.79	gold quality
gastrocnemius	UBERON:0001388	53.77	gold quality
placenta	UBERON:0001987	53.30	gold quality
colon	UBERON:0001155	53.23	gold quality
transverse colon	UBERON:0001157	53.14	gold quality
spleen	UBERON:0002106	52.17	gold quality
thoracic mammary gland	UBERON:0005200	51.97	gold quality

Single-cell (SCXA)

Detected in 1 experiment(s), a significant marker in 0.

Experiment	Marker?	Max mean expression
E-ANND-3	no	0.80

Regulation

Is transcription factor: no

Cross-species orthologs

0 orthologs

Protein

Non-coding RNA — no protein product; not a drug target.

Function

No curated pathway, Gene-Ontology, or interaction data.

Disease & clinical

No curated disease, variant, or cancer-driver associations.

Drugs & pharmacology

No drug or pharmacology data — not an established drug target.