LINC02976

Summary

LINC02976 (long intergenic non-protein coding RNA 2976, HGNC:56026) is a long non-coding RNA gene on chromosome 6p21.1.

At a glance

• Gene type: non-coding (lncRNA) — no protein product; not a drug target. Variant/disease associations are omitted (they would be positional, from an overlapping protein-coding gene).

Identifiers

Gene identifiers

Field	Value
HGNC ID	HGNC:56026
Approved symbol	LINC02976
Name	long intergenic non-protein coding RNA 2976
Location	6p21.1
Locus type	RNA, long non-coding
Status	Approved
Aliases	RP3-475N16.1
Ensembl gene	ENSG00000231113
Ensembl biotype	lncRNA
Entrez	123706548
RNAcentral	URS00026A229C — lncRNA, 1303 nt, 1 organism(s)

Gene structure

Transcript identifiers

Ensembl transcripts: 2 — 2 lncRNA

ENST00000450671, ENST00000607218

RefSeq mRNA: 0 — MANE Select: None

Canonical transcript exons

ENST00000450671 — 4 exons

Exon	Start	End
ENSE00001610167	42943798	42943970
ENSE00001667278	42940364	42940606
ENSE00001711910	42940773	42940929
ENSE00001744335	42941510	42941615

Expression profiles

Bgee: expression breadth ubiquitous, 133 present calls, max score 87.45.

Top tissues by expression

133 total, by Bgee expression score (0-100, higher = more expressed):

Tissue	Anatomy ID	Expression score	Quality
monocyte	CL:0000576	87.45	gold quality
leukocyte	CL:0000738	87.45	gold quality
granulocyte	CL:0000094	86.90	gold quality
blood	UBERON:0000178	85.25	gold quality
spleen	UBERON:0002106	82.83	gold quality
lymph node	UBERON:0000029	79.74	gold quality
body of pancreas	UBERON:0001150	79.18	gold quality
bone marrow	UBERON:0002371	78.10	gold quality
cortical plate	UBERON:0005343	78.06	gold quality
male germ line stem cell (sensu Vertebrata) in testis	CL:0000089 ∩ UBERON:0000473	77.15	silver quality
small intestine Peyer’s patch	UBERON:0003454	77.07	gold quality
small intestine	UBERON:0002108	75.68	gold quality
vermiform appendix	UBERON:0001154	74.94	gold quality
bone marrow cell	CL:0002092	74.77	gold quality
pancreas	UBERON:0001264	74.77	gold quality
stromal cell of endometrium	CL:0002255	74.67	gold quality
mucosa of stomach	UBERON:0001199	74.64	gold quality
right lobe of liver	UBERON:0001114	74.54	gold quality
cerebellar hemisphere	UBERON:0002245	74.24	gold quality
cerebellum	UBERON:0002037	74.21	gold quality
cerebellar cortex	UBERON:0002129	74.20	gold quality
right hemisphere of cerebellum	UBERON:0014890	74.10	gold quality
lower esophagus muscularis layer	UBERON:0035833	73.99	gold quality
lower esophagus	UBERON:0013473	73.97	gold quality
esophagogastric junction muscularis propria	UBERON:0035841	73.78	gold quality
right coronary artery	UBERON:0001625	73.66	gold quality
prostate gland	UBERON:0002367	73.66	gold quality
muscle layer of sigmoid colon	UBERON:0035805	73.47	gold quality
smooth muscle tissue	UBERON:0001135	73.42	gold quality
ganglionic eminence	UBERON:0004023	73.11	gold quality

Single-cell (SCXA)

Detected in 1 experiment(s), a significant marker in 0.

Experiment	Marker?	Max mean expression
E-ANND-3	no	3.81

Regulation

Is transcription factor: no

Cross-species orthologs

0 orthologs

Protein

Non-coding RNA — no protein product; not a drug target.

Function

No curated pathway, Gene-Ontology, or interaction data.

Disease & clinical

No curated disease, variant, or cancer-driver associations.

Drugs & pharmacology

No drug or pharmacology data — not an established drug target.