LINC02989

Summary

LINC02989 (long intergenic non-protein coding RNA 2989, HGNC:56100) is a long non-coding RNA gene on chromosome 11p15.3.

At a glance

• Gene type: non-coding (lncRNA) — no protein product; not a drug target. Variant/disease associations are omitted (they would be positional, from an overlapping protein-coding gene).

Identifiers

Gene identifiers

Field	Value
HGNC ID	HGNC:56100
Approved symbol	LINC02989
Name	long intergenic non-protein coding RNA 2989
Location	11p15.3
Locus type	RNA, long non-coding
Status	Approved
Aliases	lnc-MICAL2-1
Ensembl gene	ENSG00000255400
Ensembl biotype	lncRNA
Entrez	125177370
RNAcentral	URS0000D5707C — lncRNA, 570 nt, 1 organism(s)

Gene structure

Transcript identifiers

Ensembl transcripts: 6 — 6 lncRNA

ENST00000527997, ENST00000725287, ENST00000725288, ENST00000725289, ENST00000725290, ENST00000725291

RefSeq mRNA: 0 — MANE Select: None

Canonical transcript exons

ENST00000527997 — 2 exons

Exon	Start	End
ENSE00004048762	12089122	12090010
ENSE00004048768	12086871	12087120

Expression profiles

Bgee: expression breadth broad, 96 present calls, max score 71.97.

Top tissues by expression

96 total, by Bgee expression score (0-100, higher = more expressed):

Tissue	Anatomy ID	Expression score	Quality
gall bladder	UBERON:0002110	71.97	gold quality
ascending aorta	UBERON:0001496	69.63	gold quality
thoracic mammary gland	UBERON:0005200	68.92	gold quality
thoracic aorta	UBERON:0001515	68.70	gold quality
tonsil	UBERON:0002372	66.63	silver quality
descending thoracic aorta	UBERON:0002345	59.65	gold quality
left coronary artery	UBERON:0001626	59.49	gold quality
smooth muscle tissue	UBERON:0001135	55.73	gold quality
popliteal artery	UBERON:0002250	55.40	gold quality
tibial artery	UBERON:0007610	55.36	gold quality
islet of Langerhans	UBERON:0000006	54.74	gold quality
primary visual cortex	UBERON:0002436	54.40	gold quality
endometrium	UBERON:0001295	53.97	gold quality
heart	UBERON:0000948	53.57	gold quality
placenta	UBERON:0001987	53.45	gold quality
body of stomach	UBERON:0001161	52.72	gold quality
stomach	UBERON:0000945	52.11	gold quality
hindlimb stylopod muscle	UBERON:0004252	51.08	gold quality
right coronary artery	UBERON:0001625	51.01	gold quality
blood	UBERON:0000178	50.80	silver quality
vermiform appendix	UBERON:0001154	50.59	gold quality
multicellular organism	UBERON:0000468	50.37	gold quality
prostate gland	UBERON:0002367	49.93	gold quality
right atrium auricular region	UBERON:0006631	49.61	gold quality
urinary bladder	UBERON:0001255	49.48	gold quality
heart left ventricle	UBERON:0002084	49.39	gold quality
transverse colon	UBERON:0001157	49.27	gold quality
pancreas	UBERON:0001264	49.10	gold quality
muscle of leg	UBERON:0001383	48.98	gold quality
rectum	UBERON:0001052	48.72	gold quality

Single-cell (SCXA)

Detected in 1 experiment(s), a significant marker in 0.

Experiment	Marker?	Max mean expression
E-ANND-3	no	1.30

Regulation

Is transcription factor: no

Cross-species orthologs

0 orthologs

Protein

Non-coding RNA — no protein product; not a drug target.

Function

No curated pathway, Gene-Ontology, or interaction data.

Disease & clinical

No curated disease, variant, or cancer-driver associations.

Drugs & pharmacology

No drug or pharmacology data — not an established drug target.