LINC03005

Summary

LINC03005 (long intergenic non-protein coding RNA 3005, HGNC:56130) is a long non-coding RNA gene on chromosome 6p22.3.

Identifiers

Gene identifiers

Field	Value
HGNC ID	HGNC:56130
Approved symbol	LINC03005
Name	long intergenic non-protein coding RNA 3005
Location	6p22.3
Locus type	RNA, long non-coding
Status	Approved
Entrez	105374972
RNAcentral	URS0000A7779A — lncRNA, 766 nt, 1 organism(s)

Gene structure

Transcript identifiers

Ensembl transcripts: 0

RefSeq mRNA: 0 — MANE Select: None

Canonical transcript exons

None — 0 exons

Expression profiles

Top tissues by expression

0 total, by Bgee expression score (0-100, higher = more expressed):

Regulation

Is transcription factor: no

Cross-species orthologs

0 orthologs

Protein

Protein identifiers

Canonical reviewed UniProt: None (reviewed: )

All UniProt accessions (0):

RefSeq proteins (0): (*=MANE)

Domains & families (InterPro)

Structure

Experimental structures (PDB)

0 structures.

Predicted structure (AlphaFold)

Function

Pathways and Gene Ontology

Reactome pathways

0 pathways

MSigDB gene sets: 1 (showing top): chr6p22

GO Biological Process (0):

GO Molecular Function (0):

GO Cellular Component (0):

Protein interactions and networks

STRING

0 interactions, top by confidence (×1000):

IntAct

0 interactions, top by confidence:

SIGNOR signaling

0 interactions.

Disease & clinical

Clinical variants and AI predictions

ClinVar

0 variants total. Per-class counts are floors (≥ shown; pagination cap):

Classification	Count (floor)
Pathogenic	0
Likely pathogenic	0
Uncertain significance	0
Likely benign	0
Benign	0

Top pathogenic / likely-pathogenic (0)

SpliceAI

0 predictions. Top by Δscore:

AlphaMissense

0 scored. Top likely-pathogenic:

dbSNP variants (sampled 300 via entrez): RS1000018496 (6:22695253 T>C,G), RS1000092514 (6:22680731 C>G,T), RS1000099691 (6:22654968 T>C), RS1000156956 (6:22679050 A>T), RS1000160967 (6:22697827 T>C), RS1000202017 (6:22701190 G>A), RS1000212665 (6:22660128 A>G), RS1000234810 (6:22655135 A>T), RS1000294347 (6:22689494 T>G), RS1000311131 (6:22707561 C>T), RS1000372258 (6:22665837 C>G), RS1000386703 (6:22707272 G>A,T), RS1000397642 (6:22711040 A>T), RS1000427166 (6:22672248 G>A), RS1000499713 (6:22699539 T>C)

Disease associations

OMIM: gene `` | disease phenotypes:

GenCC curated gene-disease

Mondo (0):

Orphanet (0):

HPO phenotypes

0 total (0 of 0 shown, HPO-id order):

GWAS associations

0 associations (top):

Drugs & pharmacology

Drug and pharmacology data

Is drug target: no

PharmGKB: 0 entries

Clinical trials (associated diseases)

0 trials via MONDO — disease-level, not drug-specific.