LINC03008

Summary

LINC03008 (long intergenic non-protein coding RNA 3008, HGNC:56133) is a long non-coding RNA gene on chromosome 7q32.2.

At a glance

• Gene type: non-coding (lncRNA) — no protein product; not a drug target. Variant/disease associations are omitted (they would be positional, from an overlapping protein-coding gene).

Identifiers

Gene identifiers

Field	Value
HGNC ID	HGNC:56133
Approved symbol	LINC03008
Name	long intergenic non-protein coding RNA 3008
Location	7q32.2
Locus type	RNA, long non-coding
Status	Approved
Ensembl gene	ENSG00000229196
Ensembl biotype	lncRNA
Entrez	100128325
RNAcentral	URS0000BC454D — lncRNA, 534 nt, 1 organism(s)

Gene structure

Transcript identifiers

Ensembl transcripts: 16 — 16 lncRNA

ENST00000469264, ENST00000470348, ENST00000664494, ENST00000843910, ENST00000843911, ENST00000843912, ENST00000843913, ENST00000843914, ENST00000843915, ENST00000843916, ENST00000843917, ENST00000843918, ENST00000843919, ENST00000843920, ENST00000843921, ENST00000843922

RefSeq mRNA: 0 — MANE Select: None

Canonical transcript exons

ENST00000469264 — 2 exons

Exon	Start	End
ENSE00001907336	130141731	130141772
ENSE00001914610	130142155	130142539

Expression profiles

Bgee: expression breadth ubiquitous, 179 present calls, max score 80.93.

Top tissues by expression

230 total, by Bgee expression score (0-100, higher = more expressed):

Tissue	Anatomy ID	Expression score	Quality
vena cava	UBERON:0004087	80.93	gold quality
skeletal muscle tissue of rectus abdominis	UBERON:0004511	79.97	gold quality
myocardium	UBERON:0002349	74.12	gold quality
tendon of biceps brachii	UBERON:0008188	73.35	gold quality
nasal cavity epithelium	UBERON:0005384	73.27	gold quality
medial globus pallidus	UBERON:0002477	72.72	gold quality
upper arm skin	UBERON:0004263	72.55	gold quality
parotid gland	UBERON:0001831	72.54	gold quality
pons	UBERON:0000988	72.19	gold quality
cerebellar vermis	UBERON:0004720	72.05	silver quality
sperm	CL:0000019	72.00	silver quality
kidney epithelium	UBERON:0004819	71.72	gold quality
trabecular bone tissue	UBERON:0002483	71.48	silver quality
bone marrow	UBERON:0002371	70.72	gold quality
amniotic fluid	UBERON:0000173	69.72	silver quality
nipple	UBERON:0002030	69.57	gold quality
pericardium	UBERON:0002407	69.47	silver quality
ganglionic eminence	UBERON:0004023	69.33	gold quality
gall bladder	UBERON:0002110	68.94	gold quality
body of tongue	UBERON:0011876	68.71	silver quality
muscle tissue	UBERON:0002385	68.65	gold quality
ventricular zone	UBERON:0003053	68.42	gold quality
cardiac muscle of right atrium	UBERON:0003379	67.93	gold quality
nasal cavity mucosa	UBERON:0001826	67.91	gold quality
cardia of stomach	UBERON:0001162	67.69	silver quality
left ventricle myocardium	UBERON:0006566	67.56	gold quality
bone marrow cell	CL:0002092	67.20	silver quality
oocyte	CL:0000023	67.13	silver quality
gingival epithelium	UBERON:0001949	67.02	gold quality
saphenous vein	UBERON:0007318	66.80	silver quality

Single-cell (SCXA)

Detected in 1 experiment(s), a significant marker in 0.

Experiment	Marker?	Max mean expression
E-ANND-3	no	1.00

Regulation

Is transcription factor: no

Cross-species orthologs

0 orthologs

Protein

Non-coding RNA — no protein product; not a drug target.

Function

No curated pathway, Gene-Ontology, or interaction data.

Disease & clinical

No curated disease, variant, or cancer-driver associations.

Drugs & pharmacology

No drug or pharmacology data — not an established drug target.