LINC03011

Summary

LINC03011 (long intergenic non-protein coding RNA 3011, HGNC:56136) is a long non-coding RNA gene on chromosome 7q11.21.

At a glance

• Gene type: non-coding (lncRNA) — no protein product; not a drug target. Variant/disease associations are omitted (they would be positional, from an overlapping protein-coding gene).

Identifiers

Gene identifiers

Field	Value
HGNC ID	HGNC:56136
Approved symbol	LINC03011
Name	long intergenic non-protein coding RNA 3011
Location	7q11.21
Locus type	RNA, long non-coding
Status	Approved
Ensembl gene	ENSG00000237310
Ensembl biotype	lncRNA
Entrez	100289098
RNAcentral	URS0000A765C9 — lncRNA, 750 nt, 1 organism(s)

Gene structure

Transcript identifiers

Ensembl transcripts: 12 — 12 lncRNA

ENST00000445681, ENST00000452565, ENST00000654121, ENST00000666724, ENST00000669130, ENST00000669732, ENST00000719570, ENST00000719571, ENST00000719572, ENST00000719573, ENST00000719574, ENST00000719575

RefSeq mRNA: 0 — MANE Select: None

Canonical transcript exons

ENST00000445681 — 2 exons

Exon	Start	End
ENSE00001720238	66493706	66494025
ENSE00001766117	66495255	66495474

Expression profiles

Bgee: expression breadth ubiquitous, 189 present calls, max score 99.35.

Top tissues by expression

242 total, by Bgee expression score (0-100, higher = more expressed):

Tissue	Anatomy ID	Expression score	Quality
sperm	CL:0000019	99.35	gold quality
right testis	UBERON:0004534	92.45	gold quality
left testis	UBERON:0004533	92.32	gold quality
adult organism	UBERON:0007023	90.99	gold quality
testis	UBERON:0000473	89.97	gold quality
male germ line stem cell (sensu Vertebrata) in testis	CL:0000089 ∩ UBERON:0000473	85.29	gold quality
putamen	UBERON:0001874	82.82	gold quality
left adrenal gland cortex	UBERON:0035825	82.53	gold quality
caudate nucleus	UBERON:0001873	82.45	gold quality
right adrenal gland cortex	UBERON:0035827	82.25	gold quality
right adrenal gland	UBERON:0001233	82.23	gold quality
nucleus accumbens	UBERON:0001882	82.05	gold quality
left adrenal gland	UBERON:0001234	81.63	gold quality
Brodmann (1909) area 9	UBERON:0013540	81.39	gold quality
C1 segment of cervical spinal cord	UBERON:0006469	81.16	gold quality
adrenal cortex	UBERON:0001235	80.98	gold quality
pigmented layer of retina	UBERON:0001782	80.73	silver quality
anterior cingulate cortex	UBERON:0009835	80.73	gold quality
amygdala	UBERON:0001876	80.63	gold quality
prefrontal cortex	UBERON:0000451	80.49	gold quality
adenohypophysis	UBERON:0002196	80.23	gold quality
spinal cord	UBERON:0002240	79.35	gold quality
hypothalamus	UBERON:0001898	79.29	gold quality
dorsolateral prefrontal cortex	UBERON:0009834	79.17	gold quality
right lobe of liver	UBERON:0001114	78.98	gold quality
hindlimb stylopod muscle	UBERON:0004252	78.89	gold quality
pituitary gland	UBERON:0000007	78.76	gold quality
adrenal gland	UBERON:0002369	78.68	gold quality
primordial germ cell in gonad	CL:0000670 ∩ UBERON:0000991	78.59	gold quality
right frontal lobe	UBERON:0002810	78.48	gold quality

Single-cell (SCXA)

Detected in 1 experiment(s), a significant marker in 1.

Experiment	Marker?	Max mean expression
E-ANND-3	yes	4.27

Regulation

Is transcription factor: no

Cross-species orthologs

0 orthologs

Protein

Non-coding RNA — no protein product; not a drug target.

Function

No curated pathway, Gene-Ontology, or interaction data.

Disease & clinical

No curated disease, variant, or cancer-driver associations.

Drugs & pharmacology

No drug or pharmacology data — not an established drug target.