LINC03020

Summary

LINC03020 (long intergenic non-protein coding RNA 3020, HGNC:56148) is a long non-coding RNA gene on chromosome 8q13.3.

At a glance

• Gene type: non-coding (lncRNA) — no protein product; not a drug target. Variant/disease associations are omitted (they would be positional, from an overlapping protein-coding gene).

Identifiers

Gene identifiers

Field	Value
HGNC ID	HGNC:56148
Approved symbol	LINC03020
Name	long intergenic non-protein coding RNA 3020
Location	8q13.3
Locus type	RNA, long non-coding
Status	Approved
Ensembl gene	ENSG00000253967
Ensembl biotype	lncRNA
Entrez	101926892
RNAcentral	URS00003320DF — lncRNA, 2367 nt, 1 organism(s)

Gene structure

Transcript identifiers

Ensembl transcripts: 6 — 6 lncRNA

ENST00000520259, ENST00000757201, ENST00000757202, ENST00000757203, ENST00000757204, ENST00000757205

RefSeq mRNA: 0 — MANE Select: None

Canonical transcript exons

ENST00000520259 — 4 exons

Exon	Start	End
ENSE00002092378	70471134	70471845
ENSE00002093748	70484691	70485687
ENSE00002131920	70480722	70481308
ENSE00002138509	70478093	70478163

Expression profiles

Bgee: expression breadth ubiquitous, 142 present calls, max score 78.89.

Top tissues by expression

239 total, by Bgee expression score (0-100, higher = more expressed):

Tissue	Anatomy ID	Expression score	Quality
primordial germ cell in gonad	CL:0000670 ∩ UBERON:0000991	78.89	gold quality
male germ line stem cell (sensu Vertebrata) in testis	CL:0000089 ∩ UBERON:0000473	76.49	gold quality
ganglionic eminence	UBERON:0004023	71.33	gold quality
pancreatic ductal cell	CL:0002079	66.88	silver quality
cortical plate	UBERON:0005343	63.78	gold quality
smooth muscle tissue	UBERON:0001135	63.64	gold quality
ventricular zone	UBERON:0003053	63.55	gold quality
placenta	UBERON:0001987	60.63	gold quality
hindlimb stylopod muscle	UBERON:0004252	59.44	silver quality
tibialis anterior	UBERON:0001385	58.28	silver quality
epithelial cell of pancreas	CL:0000083	55.49	gold quality
ileal mucosa	UBERON:0000331	55.45	silver quality
kidney epithelium	UBERON:0004819	55.19	gold quality
granulocyte	CL:0000094	54.88	gold quality
leukocyte	CL:0000738	54.71	gold quality
rectum	UBERON:0001052	54.65	gold quality
upper leg skin	UBERON:0004262	54.61	gold quality
right adrenal gland cortex	UBERON:0035827	54.46	gold quality
cardiac muscle of right atrium	UBERON:0003379	54.34	gold quality
left ventricle myocardium	UBERON:0006566	54.23	gold quality
monocyte	CL:0000576	54.19	gold quality
mucosa of transverse colon	UBERON:0004991	54.14	gold quality
upper arm skin	UBERON:0004263	53.52	gold quality
corpus epididymis	UBERON:0004359	52.99	silver quality
deltoid	UBERON:0001476	52.81	gold quality
islet of Langerhans	UBERON:0000006	52.25	gold quality
right lobe of liver	UBERON:0001114	51.56	gold quality
pancreas	UBERON:0001264	51.44	gold quality
olfactory segment of nasal mucosa	UBERON:0005386	51.32	gold quality
body of pancreas	UBERON:0001150	51.26	gold quality

Single-cell (SCXA)

Detected in 1 experiment(s), a significant marker in 0.

Experiment	Marker?	Max mean expression
E-ANND-3	no	2.93

Regulation

Is transcription factor: no

Cross-species orthologs

0 orthologs

Protein

Non-coding RNA — no protein product; not a drug target.

Function

No curated pathway, Gene-Ontology, or interaction data.

Disease & clinical

No curated disease, variant, or cancer-driver associations.

Drugs & pharmacology

No drug or pharmacology data — not an established drug target.