LINC03027

Summary

LINC03027 (long intergenic non-protein coding RNA 3027, HGNC:48681) is a long non-coding RNA gene on chromosome 10p12.2.

Identifiers

Gene identifiers

Field	Value
HGNC ID	HGNC:48681
Approved symbol	LINC03027
Name	long intergenic non-protein coding RNA 3027
Location	10p12.2
Locus type	RNA, long non-coding
Status	Approved
Entrez	100499489
RNAcentral	URS000075E0A3 — lncRNA, 2516 nt, 1 organism(s)

Gene structure

Transcript identifiers

Ensembl transcripts: 0

RefSeq mRNA: 0 — MANE Select: None

Canonical transcript exons

None — 0 exons

Expression profiles

Top tissues by expression

0 total, by Bgee expression score (0-100, higher = more expressed):

Regulation

Is transcription factor: no

Cross-species orthologs

0 orthologs

Protein

Protein identifiers

Canonical reviewed UniProt: None (reviewed: )

All UniProt accessions (0):

RefSeq proteins (0): (*=MANE)

Domains & families (InterPro)

Structure

Experimental structures (PDB)

0 structures.

Predicted structure (AlphaFold)

Function

Pathways and Gene Ontology

Reactome pathways

0 pathways

MSigDB gene sets: 0 (showing top):

GO Biological Process (0):

GO Molecular Function (0):

GO Cellular Component (0):

Protein interactions and networks

STRING

0 interactions, top by confidence (×1000):

IntAct

0 interactions, top by confidence:

SIGNOR signaling

0 interactions.

Disease & clinical

Clinical variants and AI predictions

ClinVar

0 variants total. Per-class counts are floors (≥ shown; pagination cap):

Classification	Count (floor)
Pathogenic	0
Likely pathogenic	0
Uncertain significance	0
Likely benign	0
Benign	0

Top pathogenic / likely-pathogenic (0)

SpliceAI

0 predictions. Top by Δscore:

AlphaMissense

0 scored. Top likely-pathogenic:

dbSNP variants (sampled 300 via entrez): RS1000132405 (10:22436966 A>G), RS1000314420 (10:22436671 C>A), RS1000318799 (10:22438353 A>G), RS1000431856 (10:22436875 G>A,T), RS1000774681 (10:22435707 C>A,T), RS1000923893 (10:22437315 T>C), RS1001588451 (10:22439546 C>G), RS1001730587 (10:22437069 G>A,C,T), RS1002040646 (10:22439913 T>A), RS1002055809 (10:22436447 G>C), RS1002061593 (10:22435229 A>G), RS1002080983 (10:22435492 G>A,C,T), RS1003203820 (10:22437259 C>T), RS1003734519 (10:22436981 A>C,G), RS1003800894 (10:22436585 G>A,C,T)

Disease associations

OMIM: gene `` | disease phenotypes:

GenCC curated gene-disease

Mondo (0):

Orphanet (0):

HPO phenotypes

0 total (0 of 0 shown, HPO-id order):

GWAS associations

0 associations (top):

Drugs & pharmacology

Drug and pharmacology data

Is drug target: no

PharmGKB: 0 entries

CTD chemical–gene interactions

1 total (human), top 1 by PubMed support.

Chemical	Actions (top 5)	PubMed papers
Smoke	decreases expression	1

Clinical trials (associated diseases)

0 trials via MONDO — disease-level, not drug-specific.