LINC03028

Summary

LINC03028 (long intergenic non-protein coding RNA 3028, HGNC:56168) is a unprocessed pseudogene on chromosome 10p12.1.

At a glance

• Gene type: non-coding (transcribed_unprocessed_pseudogene) — no protein product; not a drug target. Variant/disease associations are omitted (they would be positional, from an overlapping protein-coding gene).

Identifiers

Gene identifiers

Field	Value
HGNC ID	HGNC:56168
Approved symbol	LINC03028
Name	long intergenic non-protein coding RNA 3028
Location	10p12.1
Locus type	RNA, long non-coding
Status	Approved
Ensembl gene	ENSG00000236894
Ensembl biotype	transcribed_unprocessed_pseudogene
Entrez	101929117
RNAcentral	URS0000A76C06 — lncRNA, 424 nt, 1 organism(s)

Gene structure

Transcript identifiers

Ensembl transcripts: 1 — 1 transcribed_unprocessed_pseudogene

ENST00000637960

RefSeq mRNA: 0 — MANE Select: None

Canonical transcript exons

ENST00000637960 — 8 exons

Exon	Start	End
ENSE00003792157	26605587	26605656
ENSE00003794937	26601042	26601206
ENSE00003797096	26617643	26617776
ENSE00003797599	26617272	26617380
ENSE00003797886	26577791	26577847
ENSE00003798491	26622069	26622338
ENSE00003799309	26602326	26602493
ENSE00003800411	26608383	26608470

Expression profiles

Bgee: expression breadth ubiquitous, 120 present calls, max score 91.65.

Top tissues by expression

130 total, by Bgee expression score (0-100, higher = more expressed):

Tissue	Anatomy ID	Expression score	Quality
male germ line stem cell (sensu Vertebrata) in testis	CL:0000089 ∩ UBERON:0000473	91.65	gold quality
left testis	UBERON:0004533	70.99	gold quality
right testis	UBERON:0004534	70.95	gold quality
testis	UBERON:0000473	70.75	gold quality
monocyte	CL:0000576	69.10	gold quality
leukocyte	CL:0000738	69.01	gold quality
bone marrow	UBERON:0002371	66.93	gold quality
primordial germ cell in gonad	CL:0000670 ∩ UBERON:0000991	64.62	gold quality
granulocyte	CL:0000094	63.09	gold quality
bone marrow cell	CL:0002092	62.94	silver quality
blood	UBERON:0000178	57.09	gold quality
adrenal tissue	UBERON:0018303	52.13	gold quality
calcaneal tendon	UBERON:0003701	50.13	silver quality
right adrenal gland cortex	UBERON:0035827	50.02	gold quality
spleen	UBERON:0002106	46.94	gold quality
lower esophagus mucosa	UBERON:0035834	46.54	silver quality
left adrenal gland cortex	UBERON:0035825	46.44	gold quality
right adrenal gland	UBERON:0001233	46.24	gold quality
apex of heart	UBERON:0002098	46.04	gold quality
right uterine tube	UBERON:0001302	44.65	silver quality
lymph node	UBERON:0000029	43.41	gold quality
adrenal gland	UBERON:0002369	43.26	gold quality
left adrenal gland	UBERON:0001234	42.63	gold quality
sural nerve	UBERON:0015488	41.67	gold quality
liver	UBERON:0002107	40.26	gold quality
subcutaneous adipose tissue	UBERON:0002190	40.23	gold quality
lower esophagus	UBERON:0013473	39.88	gold quality
lower esophagus muscularis layer	UBERON:0035833	39.72	gold quality
right hemisphere of cerebellum	UBERON:0014890	39.60	gold quality
adipose tissue	UBERON:0001013	39.40	gold quality

Single-cell (SCXA)

Detected in 1 experiment(s), a significant marker in 1.

Experiment	Marker?	Max mean expression
E-ANND-3	yes	3.56

Regulation

Is transcription factor: no

Cross-species orthologs

0 orthologs

Protein

Non-coding RNA — no protein product; not a drug target.

Function

No curated pathway, Gene-Ontology, or interaction data.

Disease & clinical

No curated disease, variant, or cancer-driver associations.

Drugs & pharmacology

No drug or pharmacology data — not an established drug target.