LINC03029

Summary

LINC03029 (long intergenic non-protein coding RNA 3029, HGNC:56169) is a long non-coding RNA gene on chromosome 10q11.22.

Identifiers

Gene identifiers

Field	Value
HGNC ID	HGNC:56169
Approved symbol	LINC03029
Name	long intergenic non-protein coding RNA 3029
Location	10q11.22
Locus type	RNA, long non-coding
Status	Approved
Entrez	105378292
RNAcentral	URS0000A777E5 — lncRNA, 677 nt, 1 organism(s)

Gene structure

Transcript identifiers

Ensembl transcripts: 0

RefSeq mRNA: 0 — MANE Select: None

Canonical transcript exons

None — 0 exons

Expression profiles

Top tissues by expression

0 total, by Bgee expression score (0-100, higher = more expressed):

Regulation

Is transcription factor: no

Cross-species orthologs

0 orthologs

Protein

Protein identifiers

Canonical reviewed UniProt: None (reviewed: )

All UniProt accessions (0):

RefSeq proteins (0): (*=MANE)

Domains & families (InterPro)

Structure

Experimental structures (PDB)

0 structures.

Predicted structure (AlphaFold)

Function

Pathways and Gene Ontology

Reactome pathways

0 pathways

MSigDB gene sets: 1 (showing top): chr10q11

GO Biological Process (0):

GO Molecular Function (0):

GO Cellular Component (0):

Protein interactions and networks

STRING

0 interactions, top by confidence (×1000):

IntAct

0 interactions, top by confidence:

SIGNOR signaling

0 interactions.

Disease & clinical

Clinical variants and AI predictions

ClinVar

0 variants total. Per-class counts are floors (≥ shown; pagination cap):

Classification	Count (floor)
Pathogenic	0
Likely pathogenic	0
Uncertain significance	0
Likely benign	0
Benign	0

Top pathogenic / likely-pathogenic (0)

SpliceAI

0 predictions. Top by Δscore:

AlphaMissense

0 scored. Top likely-pathogenic:

dbSNP variants (sampled 300 via entrez): RS1000293959 (10:47413737 G>A,C), RS1002411698 (10:47416007 C>T), RS1004356088 (10:47416017 A>G), RS1004957924 (10:47415161 G>C), RS1005330279 (10:47415376 G>A), RS1006372282 (10:47413971 C>T), RS1008131991 (10:47416411 C>A,G), RS1009139524 (10:47415422 G>A), RS1011564608 (10:47415753 C>T), RS1012136607 (10:47414884 C>T), RS1012579705 (10:47414676 G>T), RS1016406291 (10:47414943 C>T), RS1016783118 (10:47415164 T>G), RS1019584405 (10:47416415 C>G,T), RS1022571459 (10:47415754 C>T)

Disease associations

OMIM: gene `` | disease phenotypes:

GenCC curated gene-disease

Mondo (0):

Orphanet (0):

HPO phenotypes

0 total (0 of 0 shown, HPO-id order):

GWAS associations

0 associations (top):

Drugs & pharmacology

Drug and pharmacology data

Is drug target: no

PharmGKB: 0 entries

CTD chemical–gene interactions

2 total (human), top 2 by PubMed support.

Chemical	Actions (top 5)	PubMed papers
Air Pollutants	decreases expression, increases abundance	1
Particulate Matter	decreases expression, increases abundance	1

Clinical trials (associated diseases)

0 trials via MONDO — disease-level, not drug-specific.