LINC03031

Summary

LINC03031 (long intergenic non-protein coding RNA 3031, HGNC:56174) is a long non-coding RNA gene on chromosome 11p13.

At a glance

• Gene type: non-coding (lncRNA) — no protein product; not a drug target. Variant/disease associations are omitted (they would be positional, from an overlapping protein-coding gene).

Identifiers

Gene identifiers

Field	Value
HGNC ID	HGNC:56174
Approved symbol	LINC03031
Name	long intergenic non-protein coding RNA 3031
Location	11p13
Locus type	RNA, long non-coding
Status	Approved
Ensembl gene	ENSG00000254584
Ensembl biotype	lncRNA
Entrez	100506675
RNAcentral	URS000075E18E — lncRNA, 822 nt, 1 organism(s)

Gene structure

Transcript identifiers

Ensembl transcripts: 6 — 6 lncRNA

ENST00000525382, ENST00000531627, ENST00000531962, ENST00000734227, ENST00000734228, ENST00000734229

RefSeq mRNA: 0 — MANE Select: None

Canonical transcript exons

ENST00000525382 — 2 exons

Exon	Start	End
ENSE00004066943	32052753	32052969
ENSE00004066944	32053147	32053331

Expression profiles

Bgee: expression breadth ubiquitous, 130 present calls, max score 97.29.

Top tissues by expression

227 total, by Bgee expression score (0-100, higher = more expressed):

Tissue	Anatomy ID	Expression score	Quality
sperm	CL:0000019	97.29	gold quality
buccal mucosa cell	CL:0002336	92.54	gold quality
left testis	UBERON:0004533	88.84	gold quality
right testis	UBERON:0004534	86.99	gold quality
primordial germ cell in gonad	CL:0000670 ∩ UBERON:0000991	86.73	gold quality
testis	UBERON:0000473	86.57	gold quality
male germ line stem cell (sensu Vertebrata) in testis	CL:0000089 ∩ UBERON:0000473	86.08	gold quality
sural nerve	UBERON:0015488	83.08	gold quality
hindlimb stylopod muscle	UBERON:0004252	77.74	gold quality
pancreatic ductal cell	CL:0002079	69.60	silver quality
tibialis anterior	UBERON:0001385	66.99	silver quality
epithelial cell of pancreas	CL:0000083	66.08	gold quality
stromal cell of endometrium	CL:0002255	65.99	gold quality
cortical plate	UBERON:0005343	65.06	gold quality
adult organism	UBERON:0007023	62.70	gold quality
cortex of kidney	UBERON:0001225	61.08	gold quality
ganglionic eminence	UBERON:0004023	60.32	gold quality
ileal mucosa	UBERON:0000331	59.95	silver quality
leukocyte	CL:0000738	59.32	gold quality
calcaneal tendon	UBERON:0003701	58.23	gold quality
monocyte	CL:0000576	57.62	gold quality
deltoid	UBERON:0001476	57.04	gold quality
islet of Langerhans	UBERON:0000006	56.64	gold quality
mucosa of paranasal sinus	UBERON:0005030	56.63	gold quality
myocardium	UBERON:0002349	56.19	gold quality
cerebellar vermis	UBERON:0004720	55.58	gold quality
tendon of biceps brachii	UBERON:0008188	55.40	gold quality
cardiac muscle of right atrium	UBERON:0003379	54.90	gold quality
esophagus squamous epithelium	UBERON:0006920	54.26	gold quality
tendon	UBERON:0000043	54.24	gold quality

Single-cell (SCXA)

Detected in 1 experiment(s), a significant marker in 1.

Experiment	Marker?	Max mean expression
E-ANND-3	yes	3.59

Regulation

Is transcription factor: no

Cross-species orthologs

0 orthologs

Protein

Non-coding RNA — no protein product; not a drug target.

Function

No curated pathway, Gene-Ontology, or interaction data.

Disease & clinical

No curated disease, variant, or cancer-driver associations.

Drugs & pharmacology

No drug or pharmacology data — not an established drug target.