LINC03034

Summary

LINC03034 (long intergenic non-protein coding RNA 3034, HGNC:54360) is a long non-coding RNA gene on chromosome 15q13.3.

At a glance

• Gene type: non-coding (lncRNA) — no protein product; not a drug target. Variant/disease associations are omitted (they would be positional, from an overlapping protein-coding gene).

Identifiers

Gene identifiers

Field	Value
HGNC ID	HGNC:54360
Approved symbol	LINC03034
Name	long intergenic non-protein coding RNA 3034
Location	15q13.3
Locus type	RNA, long non-coding
Status	Approved
Ensembl gene	ENSG00000259772
Ensembl biotype	lncRNA
Entrez	283710
RNAcentral	URS0002123194 — lncRNA, 1048 nt, 1 organism(s)

Gene structure

Transcript identifiers

Ensembl transcripts: 40 — 40 lncRNA

ENST00000558109, ENST00000558388, ENST00000559094, ENST00000559853, ENST00000560812, ENST00000685492, ENST00000685870, ENST00000686309, ENST00000692933, ENST00000701141, ENST00000701403, ENST00000701658, ENST00000701679, ENST00000701759, ENST00000724439, ENST00000724440, ENST00000724441, ENST00000724442, ENST00000724443, ENST00000724444, ENST00000724445, ENST00000724446, ENST00000724447, ENST00000724448, ENST00000724449, ENST00000724450, ENST00000724451, ENST00000724452, ENST00000724453, ENST00000724454, ENST00000724455, ENST00000724456, ENST00000724457, ENST00000724458, ENST00000724459, ENST00000724460, ENST00000724461, ENST00000724462, ENST00000724463, ENST00000724464

RefSeq mRNA: 0 — MANE Select: None

Canonical transcript exons

ENST00000558109 — 2 exons

Exon	Start	End
ENSE00003983550	31229272	31229440
ENSE00004047169	31222756	31223431

Expression profiles

Bgee: expression breadth ubiquitous, 133 present calls, max score 85.54.

Top tissues by expression

136 total, by Bgee expression score (0-100, higher = more expressed):

Tissue	Anatomy ID	Expression score	Quality
spleen	UBERON:0002106	85.54	gold quality
bone marrow cell	CL:0002092	83.48	gold quality
lymph node	UBERON:0000029	83.05	gold quality
male germ line stem cell (sensu Vertebrata) in testis	CL:0000089 ∩ UBERON:0000473	80.48	gold quality
right hemisphere of cerebellum	UBERON:0014890	79.19	gold quality
cerebellar hemisphere	UBERON:0002245	78.77	gold quality
cerebellar cortex	UBERON:0002129	78.62	gold quality
cerebellum	UBERON:0002037	78.49	gold quality
mucosa of transverse colon	UBERON:0004991	77.25	gold quality
tonsil	UBERON:0002372	76.86	gold quality
rectum	UBERON:0001052	76.48	gold quality
blood	UBERON:0000178	76.23	gold quality
cerebellar vermis	UBERON:0004720	75.54	gold quality
saliva-secreting gland	UBERON:0001044	75.47	gold quality
body of stomach	UBERON:0001161	75.47	gold quality
minor salivary gland	UBERON:0001830	75.46	gold quality
sural nerve	UBERON:0015488	75.00	gold quality
fundus of stomach	UBERON:0001160	74.93	gold quality
duodenum	UBERON:0002114	74.68	gold quality
stomach	UBERON:0000945	74.53	gold quality
transverse colon	UBERON:0001157	74.23	gold quality
thymus	UBERON:0002370	74.08	silver quality
vermiform appendix	UBERON:0001154	73.94	gold quality
bone marrow	UBERON:0002371	72.28	gold quality
monocyte	CL:0000576	72.02	gold quality
leukocyte	CL:0000738	71.84	gold quality
colonic epithelium	UBERON:0000397	71.64	gold quality
small intestine Peyer’s patch	UBERON:0003454	70.91	gold quality
small intestine	UBERON:0002108	70.90	gold quality
right lung	UBERON:0002167	70.40	gold quality

Single-cell (SCXA)

Detected in 1 experiment(s), a significant marker in 1.

Experiment	Marker?	Max mean expression
E-ANND-3	yes	24.99

Regulation

Is transcription factor: no

Cross-species orthologs

0 orthologs

Protein

Non-coding RNA — no protein product; not a drug target.

Function

No curated pathway, Gene-Ontology, or interaction data.

Disease & clinical

No curated disease, variant, or cancer-driver associations.

Drugs & pharmacology

No drug or pharmacology data — not an established drug target.