LINC03042

Summary

LINC03042 (long intergenic non-protein coding RNA 3042, HGNC:33774) is a long non-coding RNA gene on chromosome 8p11.22.

At a glance

• Gene type: non-coding (lncRNA) — no protein product; not a drug target. Variant/disease associations are omitted (they would be positional, from an overlapping protein-coding gene).

Identifiers

Gene identifiers

Field	Value
HGNC ID	HGNC:33774
Approved symbol	LINC03042
Name	long intergenic non-protein coding RNA 3042
Location	8p11.22
Locus type	RNA, long non-coding
Status	Approved
Aliases	FLJ43582
Ensembl gene	ENSG00000196166
Ensembl biotype	lncRNA
Entrez	389649
RNAcentral	URS0001981391 — lncRNA, 2250 nt, 1 organism(s)

Gene structure

Transcript identifiers

Ensembl transcripts: 2 — 2 lncRNA

ENST00000648149, ENST00000649111

RefSeq mRNA: 0 — MANE Select: None

Canonical transcript exons

ENST00000648149 — 2 exons

Exon	Start	End
ENSE00003832907	38511379	38512570
ENSE00003837506	38528323	38528657

Expression profiles

Bgee: expression breadth broad, 80 present calls, max score 68.04.

Top tissues by expression

80 total, by Bgee expression score (0-100, higher = more expressed):

Tissue	Anatomy ID	Expression score	Quality
muscle tissue	UBERON:0002385	68.04	gold quality
hindlimb stylopod muscle	UBERON:0004252	54.39	silver quality
lymph node	UBERON:0000029	52.93	gold quality
prefrontal cortex	UBERON:0000451	52.77	gold quality
blood	UBERON:0000178	52.07	silver quality
esophagus mucosa	UBERON:0002469	50.42	gold quality
monocyte	CL:0000576	49.14	silver quality
islet of Langerhans	UBERON:0000006	49.12	gold quality
pancreas	UBERON:0001264	48.52	gold quality
placenta	UBERON:0001987	48.32	gold quality
muscle of leg	UBERON:0001383	48.27	gold quality
calcaneal tendon	UBERON:0003701	48.17	silver quality
frontal cortex	UBERON:0001870	48.13	gold quality
gastrocnemius	UBERON:0001388	47.83	gold quality
superior frontal gyrus	UBERON:0002661	47.65	silver quality
olfactory segment of nasal mucosa	UBERON:0005386	46.30	silver quality
kidney	UBERON:0002113	46.19	silver quality
gall bladder	UBERON:0002110	46.02	silver quality
descending thoracic aorta	UBERON:0002345	45.04	gold quality
cerebellar cortex	UBERON:0002129	44.93	silver quality
cerebellar hemisphere	UBERON:0002245	44.77	silver quality
cerebral cortex	UBERON:0000956	44.42	gold quality
heart left ventricle	UBERON:0002084	44.21	silver quality
right hemisphere of cerebellum	UBERON:0014890	43.87	silver quality
adult mammalian kidney	UBERON:0000082	43.50	silver quality
body of pancreas	UBERON:0001150	43.44	silver quality
multicellular organism	UBERON:0000468	43.30	gold quality
vermiform appendix	UBERON:0001154	43.10	silver quality
brain	UBERON:0000955	43.07	gold quality
ascending aorta	UBERON:0001496	42.90	silver quality

Single-cell (SCXA)

Detected in 1 experiment(s), a significant marker in 0.

Experiment	Marker?	Max mean expression
E-ANND-3	no	2.43

Regulation

Is transcription factor: no

Cross-species orthologs

0 orthologs

Protein

Non-coding RNA — no protein product; not a drug target.

Function

No curated pathway, Gene-Ontology, or interaction data.

Disease & clinical

No curated disease, variant, or cancer-driver associations.

Drugs & pharmacology

No drug or pharmacology data — not an established drug target.