LINC03050

Summary

LINC03050 (long intergenic non-protein coding RNA 3050, HGNC:56283) is a long non-coding RNA gene on chromosome 2p14.

At a glance

• Gene type: non-coding (lncRNA) — no protein product; not a drug target. Variant/disease associations are omitted (they would be positional, from an overlapping protein-coding gene).

Identifiers

Gene identifiers

Field	Value
HGNC ID	HGNC:56283
Approved symbol	LINC03050
Name	long intergenic non-protein coding RNA 3050
Location	2p14
Locus type	RNA, long non-coding
Status	Approved
Aliases	AC007389.3
Ensembl gene	ENSG00000235725
Ensembl biotype	lncRNA
Entrez	126568848
RNAcentral	URS00026A2152 — lncRNA, 1596 nt, 1 organism(s)

Gene structure

Transcript identifiers

Ensembl transcripts: 1 — 1 lncRNA

ENST00000420724

RefSeq mRNA: 0 — MANE Select: None

Canonical transcript exons

ENST00000420724 — 4 exons

Exon	Start	End
ENSE00001415126	65640115	65640177
ENSE00001646928	65590905	65591037
ENSE00001727588	65589566	65589819
ENSE00001734673	65601157	65602362

Expression profiles

Bgee: expression breadth ubiquitous, 113 present calls, max score 94.96.

Top tissues by expression

187 total, by Bgee expression score (0-100, higher = more expressed):

Tissue	Anatomy ID	Expression score	Quality
olfactory bulb	UBERON:0002264	94.96	silver quality
type B pancreatic cell	CL:0000169	94.88	silver quality
diaphragm	UBERON:0001103	93.86	silver quality
smooth muscle tissue	UBERON:0001135	90.57	gold quality
tongue squamous epithelium	UBERON:0006919	89.99	silver quality
left ventricle myocardium	UBERON:0006566	88.42	silver quality
mononuclear cell	CL:0000842	87.50	silver quality
cardiac muscle of right atrium	UBERON:0003379	87.14	silver quality
myocardium	UBERON:0002349	83.62	silver quality
hair follicle	UBERON:0002073	81.96	silver quality
cardia of stomach	UBERON:0001162	81.84	silver quality
CA1 field of hippocampus	UBERON:0003881	80.98	silver quality
lateral nuclear group of thalamus	UBERON:0002736	80.57	gold quality
mucosa of paranasal sinus	UBERON:0005030	80.57	silver quality
epithelial cell of pancreas	CL:0000083	80.49	silver quality
vena cava	UBERON:0004087	80.47	silver quality
epithelium of nasopharynx	UBERON:0001951	79.64	silver quality
mucosa of urinary bladder	UBERON:0001259	79.60	silver quality
dorsal plus ventral thalamus	UBERON:0001897	79.23	silver quality
subthalamic nucleus	UBERON:0001906	79.03	silver quality
oocyte	CL:0000023	78.79	gold quality
ventral tegmental area	UBERON:0002691	78.38	silver quality
male germ line stem cell (sensu Vertebrata) in testis	CL:0000089 ∩ UBERON:0000473	78.35	silver quality
cervix squamous epithelium	UBERON:0006922	77.97	gold quality
cervix epithelium	UBERON:0004801	77.37	silver quality
skeletal muscle tissue of rectus abdominis	UBERON:0004511	76.36	gold quality
bone marrow cell	CL:0002092	76.34	silver quality
Brodmann (1909) area 9	UBERON:0013540	76.29	silver quality
coronary artery	UBERON:0001621	76.27	silver quality
lateral globus pallidus	UBERON:0002476	75.97	silver quality

Single-cell (SCXA)

Detected in 1 experiment(s), a significant marker in 1.

Experiment	Marker?	Max mean expression
E-ANND-3	yes	2.93

Regulation

Is transcription factor: no

Cross-species orthologs

0 orthologs

Protein

Non-coding RNA — no protein product; not a drug target.

Function

No curated pathway, Gene-Ontology, or interaction data.

Disease & clinical

No curated disease, variant, or cancer-driver associations.

Drugs & pharmacology

No drug or pharmacology data — not an established drug target.