LINC03055

Summary

LINC03055 (long intergenic non-protein coding RNA 3055, HGNC:56352) is a long non-coding RNA gene on chromosome 6p25.1.

Identifiers

Gene identifiers

Field	Value
HGNC ID	HGNC:56352
Approved symbol	LINC03055
Name	long intergenic non-protein coding RNA 3055
Location	6p25.1
Locus type	RNA, long non-coding
Status	Approved
Entrez	105374902

Gene structure

Transcript identifiers

Ensembl transcripts: 0

RefSeq mRNA: 0 — MANE Select: None

Canonical transcript exons

None — 0 exons

Expression profiles

Top tissues by expression

0 total, by Bgee expression score (0-100, higher = more expressed):

Regulation

Is transcription factor: no

Literature-anchored findings (GeneRIF, showing 1)

• TNF-alpha-induced lncRNA LOC105374902 may function as a ceRNA for miR-1285-3p to promote the expression of RPL14, promoting the migration, invasion of cervical cancer cells. (PMID:30935691)

Cross-species orthologs

0 orthologs

Protein

Protein identifiers

Canonical reviewed UniProt: None (reviewed: )

All UniProt accessions (0):

RefSeq proteins (0): (*=MANE)

Domains & families (InterPro)

Structure

Experimental structures (PDB)

0 structures.

Predicted structure (AlphaFold)

Function

Pathways and Gene Ontology

Reactome pathways

0 pathways

MSigDB gene sets: 0 (showing top):

GO Biological Process (0):

GO Molecular Function (0):

GO Cellular Component (0):

Protein interactions and networks

STRING

0 interactions, top by confidence (×1000):

IntAct

0 interactions, top by confidence:

SIGNOR signaling

0 interactions.

Disease & clinical

Clinical variants and AI predictions

ClinVar

0 variants total. Per-class counts are floors (≥ shown; pagination cap):

Classification	Count (floor)
Pathogenic	0
Likely pathogenic	0
Uncertain significance	0
Likely benign	0
Benign	0

Top pathogenic / likely-pathogenic (0)

SpliceAI

0 predictions. Top by Δscore:

AlphaMissense

0 scored. Top likely-pathogenic:

dbSNP variants (sampled 300 via entrez): RS1000207167 (6:6895706 G>A,C), RS1000265401 (6:6890776 C>T), RS1000647809 (6:6891797 GAGA>G), RS1000683667 (6:6895907 T>G), RS1000717538 (6:6892977 T>C), RS1000928725 (6:6885758 G>A,T), RS1001018613 (6:6892205 T>C), RS1001040849 (6:6896763 T>C), RS1001109886 (6:6896544 C>A), RS1001591560 (6:6897883 A>G), RS1001617080 (6:6886701 A>G), RS1001621713 (6:6888248 G>A), RS1001853157 (6:6896705 G>A,T), RS1001958073 (6:6897371 G>A), RS1002012458 (6:6892329 A>G)

Disease associations

OMIM: gene `` | disease phenotypes:

GenCC curated gene-disease

Mondo (0):

Orphanet (0):

HPO phenotypes

0 total (0 of 0 shown, HPO-id order):

GWAS associations

0 associations (top):

Drugs & pharmacology

Drug and pharmacology data

Is drug target: no

PharmGKB: 0 entries

Clinical trials (associated diseases)

0 trials via MONDO — disease-level, not drug-specific.