LINC03056

Summary

LINC03056 (long intergenic non-protein coding RNA 3056, HGNC:56354) is a long non-coding RNA gene on chromosome 12q14.2.

At a glance

• Gene type: non-coding (lncRNA) — no protein product; not a drug target. Variant/disease associations are omitted (they would be positional, from an overlapping protein-coding gene).

Identifiers

Gene identifiers

Field	Value
HGNC ID	HGNC:56354
Approved symbol	LINC03056
Name	long intergenic non-protein coding RNA 3056
Location	12q14.2
Locus type	RNA, long non-coding
Status	Approved
Ensembl gene	ENSG00000258117
Ensembl biotype	lncRNA
Entrez	124902951
RNAcentral	URS0002A46915 — lncRNA, 1014 nt, 1 organism(s)

Gene structure

Transcript identifiers

Ensembl transcripts: 5 — 5 lncRNA

ENST00000551729, ENST00000728744, ENST00000728745, ENST00000728746, ENST00000728747

RefSeq mRNA: 0 — MANE Select: None

Canonical transcript exons

ENST00000551729 — 2 exons

Exon	Start	End
ENSE00004055514	63292622	63292936
ENSE00004055516	63359876	63360068

Expression profiles

Bgee: expression breadth broad, 53 present calls, max score 84.44.

Top tissues by expression

53 total, by Bgee expression score (0-100, higher = more expressed):

Tissue	Anatomy ID	Expression score	Quality
primordial germ cell in gonad	CL:0000670 ∩ UBERON:0000991	84.44	gold quality
male germ line stem cell (sensu Vertebrata) in testis	CL:0000089 ∩ UBERON:0000473	81.53	gold quality
thyroid gland	UBERON:0002046	69.16	gold quality
left lobe of thyroid gland	UBERON:0001120	68.78	gold quality
right lobe of thyroid gland	UBERON:0001119	65.99	gold quality
gall bladder	UBERON:0002110	62.90	gold quality
prefrontal cortex	UBERON:0000451	60.01	gold quality
monocyte	CL:0000576	56.11	gold quality
blood	UBERON:0000178	55.68	gold quality
tibial artery	UBERON:0007610	53.54	gold quality
popliteal artery	UBERON:0002250	53.41	gold quality
Brodmann (1909) area 9	UBERON:0013540	52.54	gold quality
multicellular organism	UBERON:0000468	51.91	gold quality
body of stomach	UBERON:0001161	51.20	gold quality
body of pancreas	UBERON:0001150	49.15	gold quality
gastrocnemius	UBERON:0001388	49.03	gold quality
endometrium	UBERON:0001295	48.38	silver quality
body of uterus	UBERON:0009853	47.73	gold quality
dorsolateral prefrontal cortex	UBERON:0009834	46.73	gold quality
heart left ventricle	UBERON:0002084	46.62	gold quality
brain	UBERON:0000955	46.02	gold quality
heart	UBERON:0000948	45.43	gold quality
kidney	UBERON:0002113	45.07	gold quality
esophagus mucosa	UBERON:0002469	44.78	gold quality
adipose tissue	UBERON:0001013	44.22	gold quality
subcutaneous adipose tissue	UBERON:0002190	44.12	gold quality
right frontal lobe	UBERON:0002810	44.07	gold quality
caudate nucleus	UBERON:0001873	43.47	gold quality
omental fat pad	UBERON:0010414	43.42	gold quality
adult mammalian kidney	UBERON:0000082	43.40	gold quality

Single-cell (SCXA)

Detected in 1 experiment(s), a significant marker in 0.

Experiment	Marker?	Max mean expression
E-ANND-3	no	1.48

Regulation

Is transcription factor: no

Cross-species orthologs

0 orthologs

Protein

Non-coding RNA — no protein product; not a drug target.

Function

No curated pathway, Gene-Ontology, or interaction data.

Disease & clinical

No curated disease, variant, or cancer-driver associations.

Drugs & pharmacology

No drug or pharmacology data — not an established drug target.