LINC03059

Summary

LINC03059 (long intergenic non-protein coding RNA 3059, HGNC:56366) is a long non-coding RNA gene on chromosome 14q22.3.

At a glance

• Gene type: non-coding (lncRNA) — no protein product; not a drug target. Variant/disease associations are omitted (they would be positional, from an overlapping protein-coding gene).

Identifiers

Gene identifiers

Field	Value
HGNC ID	HGNC:56366
Approved symbol	LINC03059
Name	long intergenic non-protein coding RNA 3059
Location	14q22.3
Locus type	RNA, long non-coding
Status	Approved
Aliases	RP11-108M12.3
Ensembl gene	ENSG00000258592
Ensembl biotype	lncRNA
Entrez	127379717
RNAcentral	URS0002A23442 — lncRNA, 1578 nt, 1 organism(s)

Gene structure

Transcript identifiers

Ensembl transcripts: 11 — 11 lncRNA

ENST00000551408, ENST00000554160, ENST00000716872, ENST00000716873, ENST00000716874, ENST00000716875, ENST00000716876, ENST00000716877, ENST00000716878, ENST00000716879, ENST00000716880

RefSeq mRNA: 0 — MANE Select: None

Canonical transcript exons

ENST00000551408 — 2 exons

Exon	Start	End
ENSE00004030938	57112195	57112660
ENSE00004030947	57067008	57067165

Expression profiles

Bgee: expression breadth ubiquitous, 104 present calls, max score 86.77.

Top tissues by expression

104 total, by Bgee expression score (0-100, higher = more expressed):

Tissue	Anatomy ID	Expression score	Quality
primordial germ cell in gonad	CL:0000670 ∩ UBERON:0000991	86.77	gold quality
male germ line stem cell (sensu Vertebrata) in testis	CL:0000089 ∩ UBERON:0000473	81.19	gold quality
bone marrow cell	CL:0002092	66.25	silver quality
ganglionic eminence	UBERON:0004023	64.47	gold quality
liver	UBERON:0002107	63.95	silver quality
uterine cervix	UBERON:0000002	62.87	silver quality
cortical plate	UBERON:0005343	61.66	gold quality
tonsil	UBERON:0002372	61.21	silver quality
right adrenal gland cortex	UBERON:0035827	61.21	gold quality
duodenum	UBERON:0002114	58.37	gold quality
bone marrow	UBERON:0002371	58.27	silver quality
mucosa of transverse colon	UBERON:0004991	56.67	gold quality
olfactory segment of nasal mucosa	UBERON:0005386	55.03	gold quality
stromal cell of endometrium	CL:0002255	53.83	silver quality
sural nerve	UBERON:0015488	53.48	silver quality
lymph node	UBERON:0000029	52.73	gold quality
blood	UBERON:0000178	52.45	silver quality
vermiform appendix	UBERON:0001154	51.04	gold quality
right adrenal gland	UBERON:0001233	50.96	gold quality
placenta	UBERON:0001987	50.59	gold quality
prefrontal cortex	UBERON:0000451	50.39	gold quality
islet of Langerhans	UBERON:0000006	50.36	gold quality
urinary bladder	UBERON:0001255	49.91	gold quality
smooth muscle tissue	UBERON:0001135	49.22	gold quality
kidney	UBERON:0002113	48.63	gold quality
pancreas	UBERON:0001264	48.47	gold quality
endometrium	UBERON:0001295	48.42	gold quality
gall bladder	UBERON:0002110	48.02	gold quality
dorsolateral prefrontal cortex	UBERON:0009834	48.02	gold quality
left coronary artery	UBERON:0001626	47.82	gold quality

Single-cell (SCXA)

Detected in 1 experiment(s), a significant marker in 0.

Experiment	Marker?	Max mean expression
E-ANND-3	no	2.59

Regulation

Is transcription factor: no

Cross-species orthologs

0 orthologs

Protein

Non-coding RNA — no protein product; not a drug target.

Function

No curated pathway, Gene-Ontology, or interaction data.

Disease & clinical

No curated disease, variant, or cancer-driver associations.

Drugs & pharmacology

No drug or pharmacology data — not an established drug target.