LINC03064

Summary

LINC03064 (long intergenic non-protein coding RNA 3064, HGNC:56372) is a long non-coding RNA gene on chromosome 16q12.2.

At a glance

• Gene type: non-coding (lncRNA) — no protein product; not a drug target. Variant/disease associations are omitted (they would be positional, from an overlapping protein-coding gene).

Identifiers

Gene identifiers

Field	Value
HGNC ID	HGNC:56372
Approved symbol	LINC03064
Name	long intergenic non-protein coding RNA 3064
Location	16q12.2
Locus type	RNA, long non-coding
Status	Approved
Aliases	AC026462.3
Ensembl gene	ENSG00000260963
Ensembl biotype	lncRNA
Entrez	105371264
RNAcentral	URS00026A1B72 — lncRNA, 1702 nt, 1 organism(s)

Gene structure

Transcript identifiers

Ensembl transcripts: 15 — 15 lncRNA

ENST00000564361, ENST00000565153, ENST00000566645, ENST00000655643, ENST00000659772, ENST00000660107, ENST00000660191, ENST00000661547, ENST00000661921, ENST00000663409, ENST00000666161, ENST00000669181, ENST00000690078, ENST00000691640, ENST00000827040

RefSeq mRNA: 0 — MANE Select: None

Canonical transcript exons

ENST00000564361 — 3 exons

Exon	Start	End
ENSE00002583399	52607067	52607538
ENSE00002583501	52608836	52608914
ENSE00002618184	52610690	52611059

Expression profiles

Bgee: expression breadth broad, 87 present calls, max score 86.47.

Top tissues by expression

188 total, by Bgee expression score (0-100, higher = more expressed):

Tissue	Anatomy ID	Expression score	Quality
kidney epithelium	UBERON:0004819	86.47	gold quality
sperm	CL:0000019	83.10	silver quality
epithelial cell of pancreas	CL:0000083	79.51	gold quality
buccal mucosa cell	CL:0002336	79.05	silver quality
cardiac muscle of right atrium	UBERON:0003379	76.81	gold quality
left ventricle myocardium	UBERON:0006566	76.66	gold quality
upper arm skin	UBERON:0004263	75.92	gold quality
adult mammalian kidney	UBERON:0000082	74.59	gold quality
mucosa of transverse colon	UBERON:0004991	73.22	gold quality
liver	UBERON:0002107	72.79	gold quality
oocyte	CL:0000023	72.53	gold quality
kidney	UBERON:0002113	71.65	gold quality
right lobe of liver	UBERON:0001114	71.64	gold quality
nasal cavity epithelium	UBERON:0005384	71.03	gold quality
left testis	UBERON:0004533	70.38	gold quality
endothelial cell	CL:0000115	69.92	gold quality
myocardium	UBERON:0002349	69.62	gold quality
epithelium of nasopharynx	UBERON:0001951	69.58	gold quality
testis	UBERON:0000473	69.55	gold quality
right testis	UBERON:0004534	69.10	gold quality
metanephros	UBERON:0000081	69.07	gold quality
medial globus pallidus	UBERON:0002477	68.81	gold quality
gingival epithelium	UBERON:0001949	68.66	gold quality
skeletal muscle tissue of rectus abdominis	UBERON:0004511	68.45	gold quality
esophagus squamous epithelium	UBERON:0006920	67.93	gold quality
duodenum	UBERON:0002114	67.89	gold quality
colonic mucosa	UBERON:0000317	67.88	gold quality
gingiva	UBERON:0001828	67.17	gold quality
mucosa of sigmoid colon	UBERON:0004993	66.99	silver quality
globus pallidus	UBERON:0001875	66.83	gold quality

Single-cell (SCXA)

Detected in 1 experiment(s), a significant marker in 0.

Experiment	Marker?	Max mean expression
E-ANND-3	no	2.26

Regulation

Is transcription factor: no

Cross-species orthologs

0 orthologs

Protein

Non-coding RNA — no protein product; not a drug target.

Function

No curated pathway, Gene-Ontology, or interaction data.

Disease & clinical

No curated disease, variant, or cancer-driver associations.

Drugs & pharmacology

No drug or pharmacology data — not an established drug target.