LINC03065

Summary

LINC03065 (long intergenic non-protein coding RNA 3065, HGNC:56373) is a long non-coding RNA gene on chromosome 15q21.3.

At a glance

• Gene type: non-coding (lncRNA) — no protein product; not a drug target. Variant/disease associations are omitted (they would be positional, from an overlapping protein-coding gene).

Identifiers

Gene identifiers

Field	Value
HGNC ID	HGNC:56373
Approved symbol	LINC03065
Name	long intergenic non-protein coding RNA 3065
Location	15q21.3
Locus type	RNA, long non-coding
Status	Approved
Aliases	AC010999.2
Ensembl gene	ENSG00000276524
Ensembl biotype	lncRNA
Entrez	105370833
RNAcentral	URS00026A24E8 — lncRNA, 637 nt, 1 organism(s)

Gene structure

Transcript identifiers

Ensembl transcripts: 2 — 2 lncRNA

ENST00000621974, ENST00000832688

RefSeq mRNA: 0 — MANE Select: None

Canonical transcript exons

ENST00000621974 — 2 exons

Exon	Start	End
ENSE00004248421	56887688	56888227
ENSE00004248422	56887034	56887170

Expression profiles

Bgee: expression breadth ubiquitous, 125 present calls, max score 87.69.

Top tissues by expression

125 total, by Bgee expression score (0-100, higher = more expressed):

Tissue	Anatomy ID	Expression score	Quality
male germ line stem cell (sensu Vertebrata) in testis	CL:0000089 ∩ UBERON:0000473	87.69	gold quality
colonic epithelium	UBERON:0000397	74.46	gold quality
hindlimb stylopod muscle	UBERON:0004252	67.33	gold quality
cortical plate	UBERON:0005343	66.50	gold quality
apex of heart	UBERON:0002098	65.84	gold quality
bone marrow cell	CL:0002092	65.73	silver quality
ventricular zone	UBERON:0003053	65.38	gold quality
ganglionic eminence	UBERON:0004023	63.91	gold quality
right lobe of thyroid gland	UBERON:0001119	63.64	gold quality
skeletal muscle tissue	UBERON:0001134	63.53	gold quality
corpus callosum	UBERON:0002336	63.20	gold quality
right uterine tube	UBERON:0001302	63.08	gold quality
thyroid gland	UBERON:0002046	62.97	gold quality
tonsil	UBERON:0002372	62.80	gold quality
pituitary gland	UBERON:0000007	62.71	gold quality
duodenum	UBERON:0002114	62.53	gold quality
left lobe of thyroid gland	UBERON:0001120	62.25	gold quality
adenohypophysis	UBERON:0002196	61.21	gold quality
cerebellar hemisphere	UBERON:0002245	60.42	gold quality
cerebellar cortex	UBERON:0002129	60.40	gold quality
cerebellum	UBERON:0002037	60.39	gold quality
right hemisphere of cerebellum	UBERON:0014890	60.36	gold quality
calcaneal tendon	UBERON:0003701	60.22	gold quality
substantia nigra	UBERON:0002038	59.84	gold quality
mucosa of transverse colon	UBERON:0004991	59.80	gold quality
C1 segment of cervical spinal cord	UBERON:0006469	59.33	gold quality
hypothalamus	UBERON:0001898	58.42	gold quality
myometrium	UBERON:0001296	58.38	gold quality
prefrontal cortex	UBERON:0000451	58.30	gold quality
left ovary	UBERON:0002119	58.05	gold quality

Single-cell (SCXA)

Detected in 1 experiment(s), a significant marker in 0.

Experiment	Marker?	Max mean expression
E-ANND-3	no	0.57

Regulation

Is transcription factor: no

Cross-species orthologs

0 orthologs

Protein

Non-coding RNA — no protein product; not a drug target.

Function

No curated pathway, Gene-Ontology, or interaction data.

Disease & clinical

No curated disease, variant, or cancer-driver associations.

Drugs & pharmacology

No drug or pharmacology data — not an established drug target.